CharlesJB ENCODExplorer issues

CharlesJB / ENCODExplorer

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package failing in Bioc 3.14

#57 vjcitn opened 2 years ago
0
ENCODExplorer not compatible with R (version 4.1.0) nor Bioconductor (v 3.14)

#56 new2code2021 opened 3 years ago
0
HiC question

#55 jameskozubek opened 3 years ago
0
Not available for new R (4.0.2)

#54 gyzsolt91 closed 3 years ago
3
error in metadata table

#53 vjcitn closed 4 years ago
3
Support Drosophila melanogaster?

#52 ashleymaeconard opened 4 years ago
5
missing function queryConsensusPeaks in Bioc v.2.10.0

#51 gaiatek closed 4 years ago
2
Error in clean_column from searchEncode

#50 ericfournier2 opened 5 years ago
4
Consensus

#49 ericfournier2 closed 5 years ago
10
downloadEncode() error 'curl' call had nonzero exit status

#48 lmurba opened 5 years ago
5
downloadEncode(force=FALSE) has non-intuitive behaviour.

#47 ericfournier2 opened 5 years ago
0
Inconsistencies in replicate mapping

#46 ericfournier2 closed 5 years ago
0
Changes to ENCODE metadata

#45 ericfournier2 closed 5 years ago
0
prepare_ENCODEdb breaks on empty tables

#44 ericfournier2 closed 5 years ago
0
Database is not completed?

#43 hgu0717 closed 5 years ago
2
R version

#42 sagincg closed 5 years ago
1
Restore functionality lost in last Bioconductor merge

#41 ericfournier2 closed 6 years ago
0
some metadata are not up to date?

#40 crazyhottommy closed 5 years ago
6
downloadEncode error

#39 r-lehtonen closed 5 years ago
1
downloadEncode with force == FALSE

#38 kapka2 closed 5 years ago
2
Allow searchign using NA values

#37 ericfournier2 closed 7 years ago
0
Impossible to search for items with value NA

#36 ericfournier2 closed 5 years ago
0
Fix #34. Use encode_df when df is null, regardless of parent environment

#35 ericfournier2 closed 7 years ago
0
encode_df is not used by default when called from a package

#34 ericfournier2 closed 7 years ago
0
some funcitions can not be found

#33 Solipugids closed 5 years ago
4
Add regex support to queryEncode

#32 ericfournier2 closed 7 years ago
0
queryEncode with non-NULL df variable

#31 kapka2 closed 7 years ago
0
Fixes #29. Fix path to local file for md5 hash.

#30 ericfournier2 closed 7 years ago
0
Downloading already existing files will cause an error

#29 ericfournier2 closed 7 years ago
0
Remove -O tag from curl command. Fixes issue #27.

#28 ericfournier2 closed 7 years ago
0
downloadEncode fails if the download directory is not the current directory.

#27 ericfournier2 closed 7 years ago
1
shinyEncode sources a file that does not exist

#26 ericfournier2 closed 7 years ago
0
last major pull

#25 louisgendron26 closed 8 years ago
0
pull request ERROR fixed

#24 louisgendron26 closed 8 years ago
0
week 11 with unitTest

#23 louisgendron26 closed 8 years ago
0
Week 11

#22 louisgendron26 closed 8 years ago
0
createDesign ctrl

#21 louisgendron26 closed 8 years ago
0
Week 10

#20 louisgendron26 closed 8 years ago
1
Pull request for ENCODExplorer 1.5.2

#19 louisgendron26 closed 8 years ago
0
Pull request 6 juin

#18 louisgendron26 closed 8 years ago
0
Update for encode_df & export_ENCODEdb_matrix().

#17 louisgendron26 closed 8 years ago
0
pull request week 4 try2

#16 louisgendron26 closed 8 years ago
0
pull request week 4

#15 louisgendron26 closed 8 years ago
1
absolute files

#14 biterbilen closed 8 years ago
2
pull request #3 for ENCODExplorer

#13 louisgendron26 closed 8 years ago
0
pull request #2 for ENCODExplorer

#12 louisgendron26 closed 8 years ago
1
pull request for ENCODExplorer

#11 louisgendron26 closed 8 years ago
1
Find a better fix for searchEncode new return values

#10 CharlesJB closed 8 years ago
0
Update documentation with correct file formats

#9 CharlesJB closed 8 years ago
0
queryEncode - Add support for boolean operators.

#8 CharlesJB opened 8 years ago
0