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ChiLiubio
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microeco
An R package for data analysis in microbial community ecology
GNU General Public License v3.0
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Error when run t1$cal_diff Error in if (pvalue[k] <= 0.001) sig[k] <- "***" else if (pvalue[k] <= : #Missing values should not be used where TRUE/FALSE values are required
#310
xinguo1236
closed
8 months ago
0
significance letter in plot_diff
#309
DpennaS
closed
4 months ago
2
Applicability of Residual randomization in permutation procedures (RRPP) in Microeco
#308
biazen123
opened
8 months ago
1
Mantel + Correlation heatmap
#307
DpennaS
closed
7 months ago
6
Errors in matching the OTU names in the OTU table and the tree
#306
haitilin
closed
8 months ago
2
trans_env class CCA module title error
#305
makerer5
closed
8 months ago
2
plot_bar yields different scale for relative abundance when using high_level
#304
lixiaopi1985
closed
8 months ago
1
Error when run lefse analysis
#303
LAmethyst
closed
6 months ago
4
More than 1 or 2 environmental data in microtable
#301
biazen123
closed
8 months ago
7
Category 'unidentified' when analyzing the relative abundance of species
#300
bfalco
closed
4 months ago
7
NMDS aesthetics
#299
jamorillo
closed
4 months ago
2
cal_mantel_corr()
#297
chrissy005
closed
8 months ago
3
Distance attenuation relationship
#296
makerer5
closed
8 months ago
3
Distance attenuation relationship
#295
makerer5
closed
10 months ago
0
Calculate the mean relative abundance with two variables
#294
bfalco
closed
6 months ago
10
Error: Input colors are not enough to use
#293
bingheer
closed
8 months ago
5
change color
#292
jimena18-O
closed
8 months ago
3
ploting specific taxa
#291
jamorillo
opened
10 months ago
7
why some otu were omiited when doing trans_venn ?
#289
Chuan-Jiang
closed
10 months ago
4
extracting p-values and correlation from cal_spe_func result
#288
galud27
closed
8 months ago
2
choose own colours for plots
#287
JAkorli
closed
11 months ago
1
网络分析中无法成功运行CPU多线程
#286
purplesoil
closed
11 months ago
1
dbRDA flipping vector directions
#285
spencerlong1
closed
8 months ago
2
Taxonomic rank names
#284
alecbiom
closed
11 months ago
2
Merge two otu tables
#283
MiaCoco
closed
11 months ago
4
Convert net_construct or net_analyse object to trans_network or cal_network class
#281
chrissy005
opened
12 months ago
16
The metagenomics code
#280
CYBERBOY1210
closed
11 months ago
1
Can you help me with plot_diff_cladogram?
#279
CTTST
closed
8 months ago
3
lefse plot
#278
jimena18-O
closed
8 months ago
3
problem in getting desired levels of a factor in facet_wrap of rarefaction curve
#277
apoosakkannu
opened
1 year ago
2
phyloseq2meco function of microeco doesnt work for me
#276
marjanghotbi
closed
1 year ago
1
trans_network
#275
Hobgoblin8
closed
4 months ago
3
trans_network: in function module_roles the values of z and p may calculated incorrectly
#274
trx296554555
closed
1 year ago
5
About trans_diff$plot_diff_abund function: reorder taxa according to P.adj
#273
kestlermai
closed
1 year ago
2
Cal_cor: Not all variable in the correlation matrix
#272
RoyDibakar
closed
6 months ago
6
cal_cor. Environmental factors and some important taxa
#271
jimena18-O
closed
8 months ago
6
Change the name of the axes and the name of the variables from English to Spanish in the graphs
#270
jimena18-O
closed
4 months ago
2
doubt trans_beta
#269
jamorillo
closed
11 months ago
2
font size is small
#268
mvtejesvi
closed
11 months ago
3
ancombc2 problems with taxa´s ?
#267
Christian-Benjamin
closed
4 months ago
11
Error running FlashWeave
#266
eperezv
closed
8 months ago
4
Two questions about RDA analysis
#265
lizhaojie1025
closed
11 months ago
3
Error when calculating alpha difference using cal_diff()
#264
finally-jay
closed
11 months ago
4
questions about db-RDA implementation
#263
jamorillo
opened
1 year ago
2
Network modularity accounting for positive and negative interactions
#262
spencerlong1
opened
1 year ago
6
An Error in trans_env$cal_diff (), method = "KW_dunn"
#261
sdhorse
closed
6 months ago
1
Plotting the colors with the positive and negative correlations.
#260
Aristotle1992
closed
4 months ago
4
No valid result obtained for this network
#259
UhP88
closed
4 months ago
8
Error in plot_diff_cladogram
#258
StanleyDeng27
closed
4 months ago
5
Taxa4Fun2: Predicting functions for 18S amplicon data
#257
rgn06
closed
6 months ago
2
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