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Como-DTC-Collaboration
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como-models
Pedagogical materials for learning COVID-19 transmission dynamics modelling
https://Como-DTC-Collaboration.github.io/como-models/
MIT License
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Model ode compartment structure diagrams
#77
ben18785
closed
2 years ago
0
Add model structure visualiser for each model
#76
ben18785
opened
2 years ago
1
Add equilibrium conditions for models
#75
ben18785
opened
2 years ago
0
Add a caveat to the README
#74
ben18785
opened
2 years ago
0
Contact tracing and quarantining NPI model
#73
ben18785
closed
2 years ago
1
Create default initial conditions for each model
#72
ben18785
opened
2 years ago
1
update vignettes with covid parameter function
#71
solveigvandervegt
opened
2 years ago
0
Add a model allowing tracing and isolation
#70
ben18785
closed
2 years ago
0
added covid parameter function
#69
solveigvandervegt
closed
2 years ago
1
Add ifr data to package
#68
I-Bouros
closed
2 years ago
0
Add variant-specific transmission parameters
#67
ben18785
closed
2 years ago
2
Changed package author names to be como-dtc development team
#66
ben18785
closed
2 years ago
0
Standardise vignette names
#65
ben18785
closed
2 years ago
0
Standardise vignette names
#64
ben18785
closed
2 years ago
0
Change package authors
#63
ben18785
closed
2 years ago
2
Use pkgdown to create a website
#62
ben18785
closed
2 years ago
0
Use pkgdown to make a website for the package
#61
ben18785
closed
2 years ago
2
SEIRDAge vignette: changed order and corrected typos
#60
ben18785
closed
2 years ago
0
Multiple exposed compartments model
#59
ben18785
closed
2 years ago
0
Make a model incorporating multiple exposed states
#58
ben18785
opened
2 years ago
0
Make verity et al IFR estimates part of package
#57
ben18785
closed
2 years ago
0
Added updated image plus text to readme
#56
ben18785
closed
2 years ago
0
Changed cfr over to ifr in the age-structured vignette
#55
ben18785
closed
2 years ago
0
SEIRD parameterisation: made specific to COVID-19
#54
ben18785
closed
2 years ago
0
Births, natural deaths and waning natural immunity
#53
ben18785
closed
2 years ago
8
Change CFR to IFR in places
#52
ben18785
closed
2 years ago
0
Make parameterisation of SEIRD specific to COVID-19
#51
ben18785
closed
2 years ago
1
corrected typo in docstrings of seird model
#50
ben18785
closed
2 years ago
0
SEIaImIsRD vignette edits
#49
solveigvandervegt
closed
2 years ago
0
I47 readme
#48
FarmHJ
closed
2 years ago
0
Write README
#47
FarmHJ
closed
2 years ago
1
SEIRDAge + its vignette changes
#46
ben18785
closed
2 years ago
0
Allow SEIRDAge to have age-specific rates of recovery
#45
ben18785
closed
2 years ago
1
Added in documentation that mu can vary by age
#44
ben18785
closed
2 years ago
0
SEIRDAge documentation error
#43
ben18785
closed
2 years ago
1
Make SEIRD model vignette more pedagogical
#42
ben18785
closed
2 years ago
1
I26 vaccination age struct
#41
I-Bouros
closed
2 years ago
1
Let user set tanh_slope
#40
rccreswell
opened
2 years ago
0
Allow user to set tanh_slope in SEIRDV
#39
rccreswell
opened
2 years ago
0
SEIRD vignette following Lisa's comments
#38
FarmHJ
closed
2 years ago
1
I34 moving shared generics into R/generics.R
#37
hfldai
closed
2 years ago
0
Update figure layout
#36
I-Bouros
closed
2 years ago
0
remove @aliases tag
#35
solveigvandervegt
closed
2 years ago
0
Unignore HTML files
#34
ben18785
closed
2 years ago
1
Make consistent styling for plots
#33
ben18785
closed
2 years ago
0
I20 age structured seird model with NPIs
#32
oscardm20994
closed
2 years ago
1
Whether to include the output of R0() and run() as incidences of the classes
#31
hfldai
closed
2 years ago
1
Lisa's comments from Como-model presentations
#30
ben18785
closed
2 years ago
1
I26 vaccination
#29
I-Bouros
closed
2 years ago
0
Add SEIIRD model (non-pharmaceutical interventions)
#28
IdilCazimoglu
closed
2 years ago
1
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