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DeepRank
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deeprank2
An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.
https://deeprank2.readthedocs.io/en/latest/?badge=latest
Apache License 2.0
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10
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re-order `add_feature` arguments
#633
DaniBodor
opened
9 hours ago
1
release: bump2version patch 3.0.5
#632
gcroci2
closed
3 days ago
0
release: v3.0.5
#631
gcroci2
closed
3 days ago
1
docs: add doc strings to the neural networks architectures
#630
gcroci2
closed
3 days ago
1
Migrate kanban boards to new Projects
#629
DaniBodor
closed
1 week ago
2
docs: clean up docstrings
#628
DaniBodor
closed
1 week ago
0
Remove types from docstrings
#627
DaniBodor
closed
1 week ago
3
style: make torch.nn imports more uniform
#626
DaniBodor
closed
1 week ago
1
docs: improve structure and add modules
#625
gcroci2
closed
1 week ago
1
ci: update ruff and fix linting rules
#624
DaniBodor
closed
1 week ago
0
docs: rename paper folder to joss
#623
gcroci2
closed
1 week ago
0
Fix linting
#622
DaniBodor
closed
1 week ago
1
ci: improve release workflow
#621
DaniBodor
opened
1 week ago
4
docs: clarify tutorials usage
#620
gcroci2
closed
2 weeks ago
2
New release after the sprint
#619
gcroci2
closed
3 days ago
0
docs: clarify usage of `output` column generated by the exporter
#618
gcroci2
closed
2 weeks ago
0
Clarify in docs and tutorials the `output` column in the results' dataset
#617
rubenalv
closed
2 weeks ago
1
build: make dependencies versions more reliable
#616
gcroci2
closed
1 week ago
2
build: simplify docker installation and improve the manual one
#615
gcroci2
closed
3 weeks ago
3
release: v3.0.4
#614
gcroci2
closed
1 month ago
1
Residue not found
#613
imerelli
opened
1 month ago
1
ci: simplify lint action
#612
DaniBodor
closed
1 month ago
0
CI: restore PyPI installation
#611
gcroci2
closed
1 month ago
8
release: bump patch 3.0.3
#610
gcroci2
closed
1 month ago
1
Bug: OSError: could not get source code
#609
rubenalv
closed
3 weeks ago
10
Docs - create descriptions/uses for the neural networks
#608
rubenalv
closed
3 days ago
1
Manage/set dependencies versions
#607
gcroci2
closed
1 week ago
2
fix: OSError when retrieving source code for lambda functions
#606
gcroci2
closed
1 month ago
2
Add single proteins/molecules class
#605
gcroci2
opened
2 months ago
0
Provide the trained models for various scenarios.
#602
amjjbonvin
opened
4 months ago
4
docs: improve handling pypi packaging contents and add NOTICE
#601
gcroci2
closed
3 months ago
0
docs: improve handling pypi packaging contents and add NOTICE
#600
gcroci2
closed
4 months ago
1
ci: add python3 to fix the package build
#599
gcroci2
closed
4 months ago
1
ci: set default shell for fixing the workflows
#598
gcroci2
closed
4 months ago
1
release: 3.0.2 patch
#597
gcroci2
closed
4 months ago
1
release: patch 3.0.2
#596
gcroci2
closed
4 months ago
0
Release 3.0.2
#595
gcroci2
closed
4 months ago
0
docs: add OPLS ref to the docs
#594
gcroci2
closed
4 months ago
0
Add OPLS ref to relevant files
#593
gcroci2
closed
4 months ago
0
Integrate pdbprep into codebase
#592
DaniBodor
opened
4 months ago
1
integrate pdb prep into DR2
#591
DaniBodor
closed
4 months ago
1
bug: update requirements.txt
#589
gcroci2
closed
4 months ago
1
docs: add docstring for `_check_pdb` function of features/secondary_structure.py
#588
DaniBodor
closed
4 months ago
0
ci: add action for testing the tutorials' notebooks
#587
gcroci2
closed
4 months ago
0
docs: clarify queries' usage
#586
gcroci2
closed
4 months ago
1
Clarify usage of PPI and SRV in README.
#585
DaniBodor
closed
4 months ago
0
style: update ruff
#584
DaniBodor
closed
4 months ago
0
merge dev with main
#583
gcroci2
closed
4 months ago
0
Bug: Functional group is unknown to the forcefield
#582
lloydtripp
closed
4 months ago
12
convert PSSM from 3dcons to deeprank
#581
Lsz-20
closed
3 weeks ago
2
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