DevoLearn devolearn issues

DevoLearn / devolearn

Accelerate data driven research on embryos with deep learning models :microscope:

MIT License

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Edit requirements.txt

#88 Pakhi07 closed 5 months ago
1
adding different colour for centroids and added visualisation for devograph

#87 sushmanthreddy closed 1 year ago
4
added centroids of different colour

#86 sushmanthreddy closed 1 year ago
1
added different colour to centroids of cells

#85 sushmanthreddy closed 1 year ago
4
huggingface spaces

#84 sushumereddy closed 1 year ago
0
dependency management and changes for main.yml file... #issue 81 and #issue71

#83 sushmanthreddy closed 1 year ago
2
dependency management and changes for main.yml file... #issue 81 and #issue71

#82 sushumereddy closed 1 year ago
2
changes are needed in main.yml file about python versions

#81 sushmanthreddy closed 1 year ago
0
adding requirements.in file for generating requirements.txt for better dependancy management

#80 sushmanthreddy closed 1 year ago
0
Delete .gitignore

#79 sushmanthreddy closed 1 year ago
0
The embryo_segmentor_model folder is missing from the devolearn directory

#78 Harikrishna-AL closed 1 year ago
4
changing from "pip-compile setup.py" to "pip-compile requirements.in"

#77 sushmanthreddy closed 1 year ago
1
changing from "pip-compile setup.py" to "pip-compile requirements.in"

#76 sushmanthreddy closed 1 year ago
0
changing from "pip-compile setup.py" to "pip-compile requirements.in"

#75 sushmanthreddy closed 1 year ago
0
add predict_from_video to cell_nucleus_segmentor

#74 watarungurunnn opened 2 years ago
1
Add instruction to install from the source

#73 watarungurunnn opened 2 years ago
1
Colab upgrade

#72 alon1samuel closed 2 years ago
1
use pip-compile + requirements.in for better dependency management

#71 Mayukhdeb opened 2 years ago
2
Changing instructions to install newest version of devolearn

#70 watarungurunnn closed 2 years ago
0
Colab demo requires multiple upgrades

#69 Mayukhdeb opened 2 years ago
18
Fix test fail: Due to recompute_scale_factor missing in UpsamplingBilinear2d

#68 kingjuno closed 2 years ago
3
Hotfix wrong url of the provided model.

#67 watarungurunnn closed 2 years ago
0
hotfix cell_nucleus_segmentor model_url

#66 watarungurunnn closed 2 years ago
0
Set up Codecov (#56)

#65 s0mnaths closed 3 years ago
2
Migrate from Travis CI to Github actions

#64 kingjuno closed 3 years ago
1
Minor: Fix the broken links

#63 iammarco11 closed 3 years ago
0
devolearn: add nucleus segmentation model

#62 Mainakdeb closed 3 years ago
0
Migrate from Travis CI to Github Actions

#61 Mainakdeb closed 3 years ago
1
devolearn: rename embryo_segmentor -> cell_membrane_segmentor

#60 Mainakdeb closed 3 years ago
0
devolearn: upgrade cell membrane segmentation model

#59 Mainakdeb closed 3 years ago
1
Try to integrate streamlit

#58 Mayukhdeb closed 2 years ago
2
CI: use pytest (#56)

#57 Mainakdeb closed 3 years ago
0
CI: move to pytest+codecov

#56 Mayukhdeb opened 3 years ago
2
devolearn: long term vision

#55 Mayukhdeb opened 3 years ago
2
devolearn/lineage_population_model: add postprocessing algorithm

#54 Mainakdeb closed 3 years ago
3
tests: unit tests do not check the outputs of models

#53 Mayukhdeb opened 3 years ago
2
Migration of cv2 read and write operations (videos and images) to decord and imageio

#52 aswarth123 closed 3 years ago
6
Makes all models subclass of InferenceEngine class

#51 vrutikrabadia closed 3 years ago
0
Update README.md

#50 vrutikrabadia closed 3 years ago
0
devolearn: make all models a subclass of InferenceEngine

#49 Mayukhdeb closed 3 years ago
1
Update: readme.md

#48 vrutikrabadia closed 3 years ago
0
Enhancement: Allow prediction on numpy arrays present as local variable

#47 vrutikrabadia opened 3 years ago
4
documentation: error in documentation of function lineage population model

#46 vrutikrabadia closed 3 years ago
2
Partial conversion of cv2 IO operations to imageio

#45 aswarth123 closed 3 years ago
3
update file: requirment.txt

#44 vrutikrabadia closed 3 years ago
3
move to decord/imageio for reading videos/images

#43 Mayukhdeb opened 3 years ago
5
setup: installation on colab initiates reinstallation of PyTorch

#42 Mayukhdeb closed 3 years ago
5
(Fix #40) devolearn: define base InferenceEngine class

#41 Mainakdeb closed 3 years ago
0
build a base InferenceEngine class

#40 Mayukhdeb closed 3 years ago
1
Correction and alignment of text

#39 Shruti-Raj-Vansh-Singh closed 3 years ago
0