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FCP-INDI
/
cpac
A convenience wrapper for https://github.com/FCP-INDI/C-PAC that provides a simple command line interface.
https://fcp-indi.github.io/docs/latest/user/cpac
MIT License
4
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3
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📦️ Replace `setuptools` with `poetry` & 🚨 lint codebase
#40
shnizzedy
closed
5 months ago
0
✨ Call `ba-timeseries-gradients` and `tsconcat` from wrapper
#39
shnizzedy
opened
6 months ago
0
🔖 Version 0.6.0
#38
shnizzedy
closed
1 year ago
0
Install the CodeSee workflow.
#37
ghost
closed
3 months ago
0
👽️ Upgrade to handle changes in C-PAC, Python and Mac OS
#36
shnizzedy
closed
1 year ago
1
🐛 Could not find the file `/cpac_resources/default_pipeline.yml` in container
#35
neurosurd
closed
5 months ago
4
Windows support
#34
nx10
opened
1 year ago
0
🔖 Release v0.5.0
#33
shnizzedy
closed
2 years ago
1
👷 Tests are failing in Singularity on GitHub Actions but passing locally
#32
shnizzedy
opened
2 years ago
0
✨ Add Apptainer to backends
#31
shnizzedy
opened
2 years ago
0
🔥 Remove any directories that cpac creates but does not populate
#30
shnizzedy
opened
2 years ago
0
🐛 Fix `--version`, add `enter`, `parse-resources` and `version`, and fix tests
#29
shnizzedy
closed
2 years ago
0
🐛 `utils data_config build command` `PermissionError`
#28
shnizzedy
opened
2 years ago
0
📛 Rename this tool
#27
shnizzedy
opened
2 years ago
0
add memory usage/estimation quick parser utility
#26
gkiar
closed
2 years ago
0
🚸 Just bind data config file instead of whole directory containing data config file
#25
shnizzedy
opened
2 years ago
0
🔖 [Version 0.4.0: Goodbye Singularity Hub](https://github.com/FCP-INDI/cpac/releases/tag/v0.4.0)
#24
shnizzedy
closed
2 years ago
0
🚸 Automatically bind path given in `outputSubjectListLocation` for `cpac utils data_config build`
#23
shnizzedy
opened
2 years ago
0
🐛 `cpac --version` does not return version
#22
shnizzedy
closed
2 years ago
1
🐛 `OSError: [Errno 30] Read-only file system`
#21
keithcdodd
closed
5 months ago
11
👽️ Deprecate/Singularity Hub
#20
shnizzedy
closed
2 years ago
0
🐛 Warn instead of crash for minimal config
#19
shnizzedy
closed
2 years ago
0
🐛 `-o` / `--container_option` does not work as expected
#18
shnizzedy
opened
2 years ago
0
🐛 Running a minimal config doesn't work with the wrapper
#17
shnizzedy
closed
2 years ago
0
🐛 Bad Request ("Duplicate mount point")
#16
shnizzedy
opened
3 years ago
0
🏁 Windows: `pwd` not available
#15
Evan1578
opened
3 years ago
2
✅ Expand coverage to Singularity with `--platform` and `--tag` parameters
#14
shnizzedy
closed
3 years ago
0
🔖 cpac v0.3.2: `pull`/`upgrade`; support C-PAC v1.8
#13
shnizzedy
closed
3 years ago
0
👽 Handle changes from C-PAC 1.7 to 1.8
#12
shnizzedy
closed
3 years ago
0
🚸 Add `pull`/`upgrade` command
#11
shnizzedy
closed
3 years ago
0
🐛 Pass commandline arguments through to `cpac crash`
#10
shnizzedy
closed
3 years ago
0
➖ Drop Nipype dependency
#9
shnizzedy
closed
3 years ago
0
✨ Add `pull` option to upgrade container
#8
shnizzedy
closed
3 years ago
0
🚀 Create mock C-PAC images for testing cpac
#7
shnizzedy
opened
3 years ago
0
⚡ Better handling of a local, not-specified-at-runtime Singularity image
#6
shnizzedy
opened
3 years ago
0
🚸 Handle non-Unicode terminals
#5
shnizzedy
closed
3 years ago
0
🐛 UnicodeEncodeError: 'latin-1' codec can't encode character '\u24c8' in position 8: ordinal not in range(256)
#4
shnizzedy
closed
3 years ago
0
🐛 Platform becomes `None` if `--platform` option is given after command
#3
shnizzedy
closed
3 years ago
0
🐛 Top-level options given after command aren't parsed correctly.
#2
shnizzedy
closed
3 years ago
0
[Feature] Progress tracking and scheduling
#1
anibalsolon
opened
3 years ago
1
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