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Ferlab-Ste-Justine
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Post-processing-Pipeline
Variant analysis for genome and exome VGCFs
Apache License 2.0
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feat: bump version to v2.0.0
#24
LysianeBouchard
closed
8 hours ago
0
fix github actions
#23
DamienGnst
closed
8 hours ago
0
Feat/add exomiser dockerimage
#22
DamienGnst
closed
8 hours ago
4
feat: add nextflow docker image
#21
LysianeBouchard
closed
1 day ago
0
Feat: Added nf-core module GATK4_GENOTYPEGVCFS
#20
FelixAntoineLeSieur
opened
2 days ago
2
Feat: Adds local module COMBINEGVCFS
#19
FelixAntoineLeSieur
closed
1 week ago
0
feat: add code owners
#18
LysianeBouchard
closed
1 week ago
0
feat: CLIN-3090 save nextflow log file and add nf-test unit tests
#17
LysianeBouchard
closed
1 week ago
0
Refactor config
#16
LysianeBouchard
opened
2 weeks ago
1
Extension .g.vcf.gz not supported for gvcf files in sample sheet
#15
LysianeBouchard
closed
1 week ago
2
In some processes, extra java arguments and extra command arguments both point on the same configuration variable ext.args
#14
LysianeBouchard
opened
2 weeks ago
0
fix: CLIN-3090 run test in stub mode in github workflow
#13
LysianeBouchard
closed
2 weeks ago
0
feat: CLIN-3090 Save logs and move initialization logic to PIPELINE_INITIALISATION
#12
LysianeBouchard
closed
1 week ago
1
Refactor/cleanup modules#3
#11
FelixAntoineLeSieur
closed
2 weeks ago
0
Feat/exclude_mnps into modules
#10
FelixAntoineLeSieur
closed
2 weeks ago
1
Feat/sample file format + metadata propagation
#9
FelixAntoineLeSieur
closed
1 month ago
1
Refactor/cleanup#2
#8
FelixAntoineLeSieur
closed
1 month ago
1
Feat/working version v1
#7
FelixAntoineLeSieur
closed
1 month ago
3
Feat/working version1
#6
FelixAntoineLeSieur
closed
1 month ago
0
Clean up some unnecessary folders and files
#5
FelixAntoineLeSieur
closed
2 months ago
0
doc/Update README.md
#4
FelixAntoineLeSieur
closed
2 months ago
2
test/Testing data
#3
FelixAntoineLeSieur
closed
2 months ago
0
refactor/Samplefile channel + functions
#2
FelixAntoineLeSieur
closed
2 months ago
0
refactor/Initial modification of the schemas
#1
FelixAntoineLeSieur
closed
2 months ago
1