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HCGB-IGTP
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XICRA
Small RNAseq pipeline for paired-end reads
MIT License
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test_subset.sh - miRNA analysis - urllib.error.HTTPError: HTTP Error 404: Not Found
#48
kubu4
opened
5 months ago
0
installer.sh error: multiqc 1.19 requires jinja2>=3.0.0, but you have jinja2 2.11.3
#47
kubu4
closed
5 months ago
5
TypeError: can only concatenate str (not "tuple") to str
#46
Cesnl
closed
7 months ago
3
Duplicates from miraligner
#45
jonahcullen
opened
1 year ago
2
log of commands
#44
EmeTexe
closed
7 months ago
9
Compatibility with sRNAbench
#43
jonahcullen
closed
7 months ago
1
NO samples were retrieved
#42
vetmohit89
opened
1 year ago
8
How to perform differential expression
#41
Ben7124
closed
7 months ago
1
No such file or directory when doing miRNA analysis
#40
Ben7124
closed
2 years ago
2
miRNA module not finding joined reads
#39
jonahcullen
closed
2 years ago
2
Biotype and featureCounts argument
#38
jonahcullen
closed
2 years ago
2
Missing import XICRA.modules.database in modules/tRNA.py
#37
cplessis
closed
7 months ago
5
How to install it properly
#36
Ben7124
closed
2 years ago
8
Miraligner not working
#35
Ben7124
closed
2 years ago
0
Bump bottle from 0.12.19 to 0.12.20 in /XICRA_pip/XICRA/config/python
#34
dependabot[bot]
closed
2 years ago
1
ResolvePackageNotFound
#33
dmi229
closed
1 year ago
2
Bump pillow from 8.3.2 to 9.0.1 in /XICRA_pip/XICRA/config/python
#32
dependabot[bot]
closed
2 years ago
1
New developments
#31
JFsanchezherrero
closed
2 years ago
0
ResolvePackageNotFound
#30
Chenglin20170390
closed
2 years ago
1
ModuleNotFoundError: No module named 'build.lib'
#29
ErickMUO
closed
2 years ago
2
Bump pillow from 8.3.2 to 9.0.0 in /XICRA_pip/XICRA/config/python
#28
dependabot[bot]
closed
2 years ago
1
new modules development
#27
JFsanchezherrero
closed
2 years ago
0
New developments
#26
JFsanchezherrero
closed
2 years ago
0
New module devel
#25
JFsanchezherrero
closed
2 years ago
0
miRNA exlude samples
#24
JFsanchezherrero
opened
2 years ago
0
miRNA functionality with elevated number of samples
#23
JFsanchezherrero
opened
2 years ago
1
Update Documentation
#22
JFsanchezherrero
closed
2 years ago
0
miRNA module error
#21
Ben7124
closed
2 years ago
4
Annotation file error when running biotype
#20
Ben7124
closed
2 years ago
2
Documentation re-merge
#19
MartaLoBalastegui
closed
2 years ago
0
Help trimm, edition of help miRNA
#18
MartaLoBalastegui
closed
2 years ago
0
Documentation updated
#17
MartaLoBalastegui
closed
2 years ago
0
Base quality filtering
#16
Ben7124
closed
2 years ago
4
Check multiple software options to include in piRNA module
#15
JFsanchezherrero
opened
2 years ago
1
XICRA join Error no samples were retrieved
#14
Ben7124
closed
2 years ago
2
MINTmap not found
#13
Ben7124
closed
2 years ago
3
tRNA module development
#12
JFsanchezherrero
closed
2 years ago
0
Check mulitple software options for tRNA module
#11
JFsanchezherrero
opened
2 years ago
2
understanding the miRNA output
#10
mars188
closed
2 years ago
9
update userGuide
#9
MartaLoBalastegui
closed
2 years ago
0
Add help trimm adapters
#8
JFsanchezherrero
opened
3 years ago
0
pipeline doesn't run properly on my data
#7
mars188
closed
2 years ago
7
miRNA analysis crashed
#6
blaizereal
closed
2 years ago
4
module 'HCGB' has no attribute 'functions'
#5
ANDdna1991
closed
1 year ago
17
Fix setup.py
#4
JFsanchezherrero
closed
2 years ago
1
Missing software in conda bioconda
#3
JFsanchezherrero
closed
3 years ago
5
Developer
#2
JFsanchezherrero
closed
4 years ago
0
Create LICENSE
#1
JFsanchezherrero
closed
4 years ago
0