HenrikBengtsson affxparser issues

HenrikBengtsson / affxparser

🔬 R package: This is the Bioconductor devel version of the affxparser package.

http://bioconductor.org/packages/devel/bioc/html/affxparser.html

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issues

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Rtools 4.4 updates to affxparser

#49 kasperdanielhansen opened 3 months ago
0
R CMD INSTALL: Failing to install on MS Windows and R 4.3

#48 HenrikBengtsson closed 1 year ago
4
R CMD check WARNINGs: catching polymorphic type ‘class Except’ by value [-Wcatch-value=]

#47 HenrikBengtsson closed 1 year ago
2
"CMD check" failure on Linux ARM64

#46 martin-g opened 1 year ago
14
R CMD check WARNINGs: Compiler warnings (from `-Waddress-of-packed-member`)

#45 HenrikBengtsson opened 1 year ago
1
Rd syntax errors

#44 HenrikBengtsson closed 1 year ago
1
Read multiple CEL files with output similar to affy::justRMA

#43 drhmoosavi opened 1 year ago
0
affxparser 1.68.0 fails to install when compiled with R built with -shared (required for RStudio)

#42 HenrikBengtsson closed 2 years ago
2
Installing Error

#41 Christopher-Yang-Chq closed 2 years ago
8
MS Windows: Backward compatibility for R (< 4.0.0)

#40 HenrikBengtsson opened 2 years ago
0
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’

#39 HenrikBengtsson closed 2 years ago
1
R CMD check NOTEs: Found ‘printf’, possibly from ‘printf’ (C), etc.

#38 HenrikBengtsson opened 2 years ago
1
UCRT patch from Tomas Kalibra

#37 kasperdanielhansen closed 2 years ago
2
Build error

#36 starsareintherose closed 2 years ago
11
R CMD build/check warning on non-portable filenames (too long)

#35 HenrikBengtsson closed 2 years ago
0
ROBUSTNESS: Add explicit 'stringsAsFactors' arguments [rbind]

#34 HenrikBengtsson closed 2 years ago
0
ROBUSTNESS: Add explicit 'stringsAsFactors' arguments [data.frame]

#33 HenrikBengtsson closed 2 years ago
0
CLEANUP: Move email address from Rd files to DESCRIPTION

#32 HenrikBengtsson closed 5 years ago
0
Add src/init.c with R_registerRoutines() and R_useDynamicSymbols()

#31 HenrikBengtsson closed 2 years ago
1
CLEANUP: append(x, y) -> c(x, y)

#30 HenrikBengtsson closed 7 years ago
0
DUPLICATE: REMOVED

#29 HenrikBengtsson closed 7 years ago
0
CLEANUP: Partial argument names

#28 HenrikBengtsson closed 7 years ago
1
BUG: Unload package does not unload DLL

#27 HenrikBengtsson closed 7 years ago
1
CLEANUP: Delete 10-year old R_affx_test_*_cmdline.cpp files?

#26 HenrikBengtsson closed 8 years ago
2
For the records: Add rationale for src/_mingw.h

#25 HenrikBengtsson opened 8 years ago
3
Update _mingw.h for the 4.9.3 toolchain

#24 jimhester closed 8 years ago
0
Potential Bug in convertCDF()

#23 arubio2 closed 8 years ago
4
Breaks with new Windows gcc 3.9.3 toolchain

#22 kasperdanielhansen closed 8 years ago
21
Bug: inclusion of header files

#21 kasperdanielhansen closed 8 years ago
8
WISH: Read Axiom CEL files

#20 HenrikBengtsson opened 8 years ago
7
METACRAN: Keep README.md so it appears on METACRAN

#19 HenrikBengtsson closed 7 years ago
0
hta20_Hs_ENTREZG.cdf causes readCdfNNN() to core dump

#18 HenrikBengtsson closed 8 years ago
5
convertCel(..., newChipType) fail for Calvin/v1 CEL files

#17 HenrikBengtsson opened 8 years ago
1
CORE DUMP: readCelHeader() can cause R to core dump

#16 HenrikBengtsson closed 9 years ago
4
CORE DUMP: readCel and readCelHeader fail on 2-channel Axiom CEL file

#15 kmclough closed 9 years ago
7
memory errors

#14 kasperdanielhansen closed 9 years ago
2
CORE DUMP: readCel() on Calvin/v4 CEL file may crash/core dump R

#13 HenrikBengtsson closed 9 years ago
1
readCcgHeader() gives unnecessary readBin() warning

#12 HenrikBengtsson closed 9 years ago
1
convertCel() gives "Error in sprintf("GridCorner%s=%d %d\n" ... invalid format '%d' ...)

#11 HenrikBengtsson closed 9 years ago
3
PORTABILITY: Package assumes GNU make

#10 HenrikBengtsson closed 9 years ago
8
Removed -Wno-unused-private-field again; gives compile notes and even er...

#9 HenrikBengtsson closed 9 years ago
0
Update package title to use Title Case

#8 HenrikBengtsson closed 9 years ago
1
Update R_affx_clf_pgf_parser.cpp

#7 deepstop closed 9 years ago
1
error: use of undeclared identifier 'finite'; did you mean 'isfinite'? (was: OSX 10.9 (Mavericks) build generates concerning compile warnings)

#6 HenrikBengtsson closed 2 years ago
9
readPgf(): Validate argument 'indices' against header$probesets, iff available

#5 HenrikBengtsson closed 9 years ago
1
readPgf(): Coerce certain header fields to integers

#4 HenrikBengtsson closed 9 years ago
1
Several read functions do not handle zero-length indices

#3 HenrikBengtsson opened 9 years ago
3
function readPgf(file) does not read elements

#2 deepstop closed 9 years ago
17
Update R_affx_clf_pgf_parser.cpp

#1 deepstop closed 9 years ago
1