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HenriquesLab
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ZeroCostDL4Mic
ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy
MIT License
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Fixed PDF generation functions
#275
mariodlrosario
closed
1 year ago
4
MaskRCNN - Fiji macro
#274
pejmanrasti
closed
7 months ago
1
ModuleNotFoundError: No module named 'splinegenerator'
#273
carmenrt
opened
1 year ago
3
Colab runtime
#272
ctr26
closed
1 year ago
1
[Feature] Full notebook CI testing
#271
ctr26
opened
1 year ago
2
[WIP] Dl4mic
#270
ctr26
opened
1 year ago
1
Unable to use the TF_SavedModel in Stardist 2D plugin in Fiji
#269
beitea
opened
1 year ago
2
Please mark YoloV2 as nonfunctional
#268
jonversusjon
closed
1 year ago
1
Dependencies txt files for local GPU use
#267
harryofhorsley
closed
1 year ago
2
Issue with training 3D U-Net using ZeroCostDL4Mic: validation set
#266
jbogomolovas2
opened
1 year ago
2
2D Stardist keeps crashing when Generating prediction(s) from unseen dataset
#265
GiuseppeCiccone96
opened
1 year ago
1
StarDist 2D- Encountering error while exporting the model to BioImage Model Zoo format
#264
monbsi
closed
1 year ago
1
StarDist 2D- Encountering an error while trying to export the model to Bioimage model zoo format(Section 5.3.)
#263
anirbannavalarch
closed
1 year ago
5
StarDist_2D -- on official sample data prediction fails with "TypeError" inside "big.py"
#262
fjug
closed
7 months ago
3
CARE_2D training termination
#261
BelES123
closed
1 year ago
2
Adjusting dependencies to JupySQL
#260
idomic
closed
1 year ago
2
Error encountered while performing error mapping and quality metrics estimation
#259
anirbannavalarch
closed
7 months ago
3
2D_Noise2Void fail to initialize on Colab
#258
alexcarisey
closed
1 year ago
1
Stardist 2D prediction error output , 1000*1000 with 16bit
#257
mdoaskndfweon
opened
1 year ago
1
Stardist error when create dataset obeject
#256
mdoaskndfweon
closed
1 year ago
4
Error when loading key dependencies CARE_2D
#255
BelES123
closed
1 year ago
1
SEM images without pre/post processing of size 1024x1024 can be used to train the model and the number of images of size 1024x1024 required to train the model
#254
anirbannavalarch
closed
1 year ago
2
Re-training StarDist 2D to create model and avoid runtime disconnected error
#253
anirbannavalarch
closed
1 year ago
6
Tracking file option missing
#252
zhengdiao111
closed
1 year ago
0
start_interactive_segmentation_local_installation
#251
tomMEM
closed
1 year ago
3
Error in Install Cellpose and 1.3. Load key dependencies Cellpose (2D and 3D)
#250
DigiQueen
closed
1 year ago
1
Error in 1.3. Load key dependencies StarDist_2D
#249
BelES123
opened
1 year ago
10
Updating dependency to jupysql
#248
idomic
closed
1 year ago
1
pix2pix Model Evaluation
#247
akabago
closed
7 months ago
2
YOLOv2 section 1.3 tensorflow
#246
K-Sachie
opened
1 year ago
2
Bump ipython from 7.9.0 to 8.10.0 in /requirements_files
#245
dependabot[bot]
closed
1 year ago
1
Bump werkzeug from 1.0.1 to 2.2.3 in /requirements_files
#244
dependabot[bot]
closed
1 year ago
1
Bump notebook from 6.3.0 to 6.4.12 in /requirements_files
#243
dependabot[bot]
closed
1 year ago
1
Bump future from 0.16.0 to 0.18.3 in /requirements_files
#242
dependabot[bot]
closed
1 year ago
1
Bump nbconvert from 5.6.1 to 6.5.1 in /requirements_files
#241
dependabot[bot]
closed
1 year ago
1
more requierment files
#240
twegier
closed
1 year ago
3
Unable to connect to GPU backend in pix2pix notebook
#239
akabago
closed
1 year ago
1
UNET3D install and Stardist 3D predition result
#238
jinxsfe
closed
7 months ago
19
Stardist error message when running multiple images in google drive
#237
psunkava
opened
1 year ago
1
Error when loading pretrained stardist model in fiji
#236
CelineNicky
closed
1 year ago
5
StarDist_3D image artifact issue
#235
StefanMilde
opened
1 year ago
7
for question relate the Stardist(2D and 3D) 5.2 error mapping and quality metrics estimation
#234
jinxsfe
closed
1 year ago
5
Update EmbedSeg_2D_ZeroCostDL4Mic.ipynb
#233
aminrezaei-img
closed
1 year ago
0
Cellpose section 4.2 FileNotFoundError
#232
Burt3
closed
1 year ago
9
fixed splinegenerator import
#231
brunomsaraiva
closed
1 year ago
0
Cellpose issue: imwrite() got an unexpected keyword argument 'compress'
#230
jbogomolovas2
closed
1 year ago
2
imwrite() error with StarDist3D 6.1 generate predictions
#229
GeorginaSV
closed
1 year ago
2
Issue with StarDist2D 6.1 Generate predictions
#228
mzouiouich
closed
1 year ago
1
Bump certifi from 2020.12.5 to 2022.12.7 in /requirements_files
#227
dependabot[bot]
closed
1 year ago
1
StarDist2: tifffile ERROR
#226
wyplogin
closed
1 year ago
2
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