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HopkinsIDD
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cholera-mapping-pipeline
Formerly part of cholera-taxonomy. The map creation scripts, packages, and file structure
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new updates about manuscript figures and functions
#597
QLLZ
opened
3 weeks ago
0
Update postprocessing.R
#596
QLLZ
closed
2 months ago
0
Update pull_data_helpers.R
#595
QLLZ
closed
2 months ago
0
Update mapping_manuscript_stats.Rmd
#594
QLLZ
closed
2 months ago
0
updated scripts for mini manuscript stats
#593
QLLZ
closed
3 months ago
0
Update country_slides.Rmd
#592
QLLZ
closed
3 months ago
0
Dev update postprocessing
#591
QLLZ
closed
3 months ago
0
Dev
#590
QLLZ
closed
3 months ago
0
Risk category for thresholds of 95 and 50%
#589
javierps
closed
4 months ago
0
Create country_slides.Rmd
#588
QLLZ
closed
3 months ago
1
Update mapping_manuscript_stats.Rmd
#587
QLLZ
closed
3 months ago
0
Manuscript stats report - outbreak analysis
#586
javierps
closed
4 months ago
0
Dev update postprocessing
#585
eclee25
closed
4 months ago
0
Outbreak extraction coverage report
#584
christinaalam
closed
4 months ago
0
WHO outbreak analysis
#583
javierps
closed
4 months ago
0
Computation of manuscript stats
#582
javierps
closed
4 months ago
0
Save draws of grid rates/cases
#581
javierps
closed
4 months ago
0
New shell script to install R packages for R 4.2 on Rockfish
#580
fang19911030
opened
6 months ago
0
Tables with mean annual cases by admin level
#579
javierps
closed
6 months ago
0
More update postprocessing
#578
javierps
closed
7 months ago
0
Update output_figures_and_tables.R
#577
QLLZ
closed
7 months ago
0
Another update postprocessing
#576
javierps
closed
7 months ago
0
Update make_final_figures_and_tables.R
#575
QLLZ
closed
7 months ago
0
Dev update postprocessing
#574
javierps
closed
7 months ago
0
Yet more postprocessing
#573
javierps
closed
7 months ago
0
Dev update postprocessing
#572
eclee25
closed
7 months ago
0
Update output_figures_and_tables.R
#571
QLLZ
closed
7 months ago
0
Update shapefile_utils.R
#570
QLLZ
closed
7 months ago
0
Add missing packages and additional checks
#569
fang19911030
opened
7 months ago
0
Update plot_DroppedData_table.R
#568
QLLZ
closed
7 months ago
1
updated shell scripts for running postprocessing code
#567
QLLZ
closed
7 months ago
0
Revert setting Mainland and ZNZ as ADM0 level
#566
javierps
closed
7 months ago
0
More postprocessing
#565
javierps
closed
7 months ago
0
Dev drop low pop lps fix
#564
eclee25
closed
7 months ago
0
Update prepare_stan_input.R
#563
QLLZ
closed
7 months ago
1
Sfrac upper limit to exactly 1
#562
javierps
closed
8 months ago
0
Fix imputation for multiple ADM0 locations
#561
javierps
closed
7 months ago
1
Drop low pop lps
#560
javierps
closed
7 months ago
1
Fix aggregation
#559
javierps
closed
8 months ago
1
Clean all temporary tables
#558
javierps
closed
8 months ago
0
Dev taxdat data pull sql
#557
QLLZ
closed
7 months ago
0
Cap values of w
#556
javierps
closed
8 months ago
1
adding raster processing script
#555
mustafasikder
opened
9 months ago
0
Dev fix censoring thresh 1
#554
eclee25
closed
9 months ago
0
Update plot_MCMC.R
#553
QLLZ
closed
9 months ago
0
stop clone cholera-config repo
#552
fang19911030
closed
9 months ago
0
Fix population bug due to ordering of output shapefiles
#551
javierps
closed
9 months ago
0
Fix bug when censoring thresh is 1
#550
javierps
closed
9 months ago
1
remove set precision
#549
javierps
closed
9 months ago
1
Dev cleanup
#548
eclee25
closed
9 months ago
0
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