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ICB-DCM
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parPE
Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.
MIT License
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Release 0.4.10
#382
dweindl
closed
8 months ago
1
setup.py -> pyproject.toml
#381
dweindl
closed
8 months ago
1
PEtab pipeline: Only compute sensitivities with respect to optimized parameters
#380
dweindl
opened
8 months ago
0
CITATION.cff
#379
dweindl
closed
8 months ago
1
Update AMICI to v0.20.0
#378
dweindl
closed
8 months ago
1
Updated elgohr/Publish-Docker-Github-Action to a supported version (v5)
#377
elgohr
closed
1 year ago
3
Update image
#376
dweindl
closed
1 year ago
1
Add minibatch documentation to RTD
#375
dweindl
closed
1 year ago
1
Docker clang
#374
dweindl
closed
1 year ago
1
Update AMICI to v0.12.0
#373
dweindl
closed
1 year ago
1
Update to changed petab test suite
#372
dweindl
closed
2 years ago
1
Update AMICI to v0.11.28
#371
dweindl
closed
2 years ago
1
Release 0.4.9
#370
dweindl
closed
2 years ago
1
Update AMICI to v0.11.23
#369
dweindl
closed
2 years ago
1
fix #367
#368
MerktSimon
closed
2 years ago
2
Update master branch of GoogleTestSuite to main
#367
MerktSimon
closed
2 years ago
2
Improve hierarchical optimization preprocessing
#366
dweindl
closed
2 years ago
1
KeyError: 'observableParameters'
#365
dweindl
closed
2 years ago
0
Update AMICI to v0.11.20
#364
dweindl
closed
2 years ago
1
Replace pthreads by C++ thread/mutex/condition
#363
dweindl
closed
8 months ago
3
Release 0.4.8
#362
dweindl
closed
2 years ago
1
Add option to specify maximum number of threads for multi-start optimization
#361
dweindl
closed
2 years ago
1
Various cleanup
#360
dweindl
closed
2 years ago
1
Option to specify maximum number of threads
#359
dweindl
closed
2 years ago
0
CI: Update sonar scanner
#358
dweindl
closed
2 years ago
1
Update AMICI to v0.11.19
#357
dweindl
closed
2 years ago
1
Docker image with fides optimizer
#356
dweindl
closed
2 years ago
1
Added a draft for minibatch optimization documentation
#355
paulstapor
closed
3 years ago
2
Update AMICI
#354
dweindl
closed
3 years ago
1
Feature parpe to pypesto history
#353
PaulJonasJost
opened
3 years ago
3
Release 0.4.7
#352
dweindl
closed
3 years ago
1
Fix documentation build
#351
dweindl
closed
3 years ago
1
Update AMICI to v0.11.18
#350
dweindl
closed
3 years ago
1
Converting result files to pypesto format
#349
dweindl
opened
3 years ago
0
Make HDF5 output more configurable
#348
dweindl
opened
3 years ago
0
Update AMICI to develop@8ef53c88
#347
dweindl
closed
3 years ago
1
Cleanup PEtab import
#346
dweindl
closed
3 years ago
1
Fix race condition with parallel HDF5 calls
#345
dweindl
closed
3 years ago
1
Fix HDF5 generation for state reinitialization with estimated initial…
#344
dweindl
closed
3 years ago
1
Support for forward sensitivities
#343
dweindl
opened
3 years ago
0
Release 0.4.6
#342
dweindl
closed
3 years ago
1
Update AMICI to v0.11.17
#341
dweindl
closed
3 years ago
1
Add optimizer: fides-cpp
#340
dweindl
closed
3 years ago
1
Update AMICI (v0.11.16)
#339
dweindl
closed
3 years ago
1
Fetch googletest and change to .cpp for IDE integration
#338
dweindl
closed
3 years ago
1
Update DLIB optimizer interface
#337
dweindl
closed
3 years ago
2
Update AMICI to v0.11.15
#336
dweindl
closed
3 years ago
1
Update supermuc build script
#335
dweindl
closed
3 years ago
1
Fix: ICC does not support <filesystem>
#334
dweindl
closed
3 years ago
1
Fix/update IpOpt download script for better handling of libcoinhsl
#333
dweindl
closed
3 years ago
1
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