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ICGC-TCGA-PanCancer
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CGP-Somatic-Docker
Dockerised and simplified version of SeqWare-CGP-SomaticCore
GNU Affero General Public License v3.0
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Feature/support new schema salad
#23
garyluu
closed
3 years ago
0
standard-output-names
#22
lindaxiang
closed
5 years ago
0
Finalize outputs
#21
lindaxiang
closed
5 years ago
0
Docker build alternative
#20
junjun-zhang
closed
5 years ago
0
Alternative way to build Docker image when original Dockerfile is too old to build
#19
junjun-zhang
closed
5 years ago
1
A few improvements: remove hardcoded /var/spool/cwl; expose cpu and memory to be set by user or use sensible defaults
#18
lindaxiang
closed
5 years ago
2
Expose CPU cores and memory parameters to CWL
#17
junjun-zhang
closed
5 years ago
1
update documentation in dockstore.cwl for newer tested cwltool version
#16
junjun-zhang
closed
5 years ago
0
Reference bundle for 38
#15
W4RJ4
closed
6 years ago
1
Replace references to /var/spool/cwl with $(runtime.outdir)
#14
denis-yuen
closed
5 years ago
1
It appears SeqWare was not fully installed while building the docker image
#13
junjun-zhang
opened
7 years ago
0
Duplicated key in YAML
#12
junjun-zhang
opened
7 years ago
1
Feature/gosu experiment
#11
denis-yuen
closed
7 years ago
0
ERROR io.dockstore.common.FileProvisioning - Could not link
#10
brainstorm
closed
7 years ago
5
System wide Java is 1.7, not 1.8 as required by Dockstore
#9
brainstorm
closed
7 years ago
4
Feature/docktester change take 2
#8
denis-yuen
closed
7 years ago
0
Updates to WDL
#7
adamstruck
closed
8 years ago
2
Feature/cwl1
#6
denis-yuen
closed
8 years ago
1
test data - 2
#5
denis-yuen
closed
8 years ago
5
test data - 1
#4
denis-yuen
closed
8 years ago
2
Feature/dockerize
#3
adamstruck
closed
8 years ago
0
Feature/generalized docker
#2
adamstruck
closed
8 years ago
0
Feature/dockerize
#1
keiranmraine
closed
8 years ago
0