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Illumina
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Canvas - Copy number variant (CNV) calling from DNA sequencing data
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how to use FlagUniqueKmers ?
#90
bioinfornatics
closed
6 years ago
1
Expecting ploidyVcfFile in CanvasPartition
#89
Rashesh7
opened
6 years ago
10
Filtered or unfiltered germline SNPs for Canvas Germline-WGS?
#88
jnktsj
closed
6 years ago
4
filter-bed parameter / option
#87
BenoitFiset
opened
6 years ago
4
ERROR: Canvas workflow error: System.ArgumentOutOfRangeException: Index was out of range.
#86
BenoitFiset
opened
6 years ago
5
-genome-folder. The files genome.fa and GenomeSize.xml
#85
BenoitFiset
opened
6 years ago
4
FlagUniqueKmers estimated run time for a GRCh38 - 3.1G Genome file
#84
BenoitFiset
opened
6 years ago
17
Conversion from raw snp142Common.txt.gz to dbsnp.vcf and update / questions about FAQ.md file (Strelka2)
#83
BenoitFiset
closed
6 years ago
10
libhostfxr.so could not be found
#82
jingjin0322
opened
6 years ago
0
Germline-WGS crashing
#81
cheffelfinger
closed
5 years ago
1
Executable permission error in recent releases
#80
osowiecki
opened
6 years ago
0
Germline-WGS: System.ArgumentOutOfRangeException: Specified argument was out of the range of valid values (Canvas v1.32)
#79
NMNS93
opened
6 years ago
0
Germline-WGS: too many LOH? (Canvas-1.32)
#78
shamardina
opened
6 years ago
1
Canvas-1.32: FlagUniqueKmers.dll fails in dotnet 1.1.5
#77
shamardina
closed
6 years ago
1
Preparing non-human genome for Canvas
#76
cheffelfinger
closed
6 years ago
2
Can not run canvas on Fedora 26
#75
YulongNiu
closed
6 years ago
2
need sample test data
#74
YulongNiu
opened
6 years ago
0
System.ArgumentOutOfRangeException: Index was out of range
#73
Gerde89
opened
6 years ago
4
is "canvas" tested on Centos7?
#72
Sinan81
opened
6 years ago
3
Somatic-WGS can not run
#71
Aliyabai
closed
6 years ago
5
Canvas Somatic-Enrichment not running in every version of canvas from 1.25 to 1.30
#70
aldembert
closed
5 years ago
4
NullReferenceException when running Germline-WGS
#69
fbattke
opened
6 years ago
12
mono error code 137 and "object was used after being disposed"
#68
dariober
closed
6 years ago
1
Pipeline for tumor-normal analysis
#67
dariober
closed
6 years ago
1
Unable to generate kmer.fa by FlagUniqueKmers.dll
#66
Aliyabai
closed
6 years ago
8
Canvas crashing on sample
#65
RichardCorbett
closed
6 years ago
1
HCC2218 truth set
#64
robrollback
closed
6 years ago
4
CanvasSomaticCaller.dll failing
#63
jlac
closed
6 years ago
1
Tumor-normal-enrichment Mode for Version 1.25 and up
#62
ghost
closed
6 years ago
4
Update README to point at S3 instead of box
#61
StephenTanner
closed
7 years ago
0
Paired Somatic WGS?
#60
jlac
closed
6 years ago
3
Bin sizes and .binned files
#59
alvaralmstedt
opened
7 years ago
5
Canvas .dll files are 32-bit?
#58
susanchacko
closed
7 years ago
2
Error running Canvas error code 134
#57
wongs2
closed
6 years ago
5
System.Exception: Cannot calculate median of an empty SortedList.
#56
fannyhartmann
opened
7 years ago
3
Manually Generating GenomeSize.xml - "md5" field
#55
ghost
closed
7 years ago
1
Canvas reference data
#54
susanchacko
closed
6 years ago
5
Unable to download reference genome files
#53
jlac
closed
7 years ago
6
help with .NET execution
#52
RichardCorbett
closed
7 years ago
3
Canvas version 1.25.0
#51
sidratools
closed
6 years ago
4
chromosome notation does not match
#50
chenshan03
closed
7 years ago
11
Can you send GenomeSize.xml and filter13.bed to me?
#49
a81501457
closed
7 years ago
0
How to make or download the hg19 reference fastq and xml file?
#48
amitgsir
closed
7 years ago
3
Low tumour purity estimation (< 20% purity)
#47
sternp
closed
7 years ago
2
Unable to access input reference files for GRCh38 from box
#45
knagulapalli
closed
7 years ago
5
Limit of detection (LOD) of canvas?
#44
geekgeekhello
closed
6 years ago
2
Update README.md and to Canvas v1.25
#43
sivakhno
closed
7 years ago
0
What are -t and -n values in Weaver LITE ?
#42
Shrutikapil
closed
7 years ago
1
Canvas Run is failing at CanvasSomaticCaller.exe step
#41
Shrutikapil
closed
6 years ago
4
Merging of multiple germline CNV VCF files
#40
holtgrewe
closed
7 years ago
2
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