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ImagingDataCommons
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IDC-Tutorials
Self-guided notebook tutorials to help get started with using IDC
BSD 3-Clause "New" or "Revised" License
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Pathology notebook update
#74
DanielaSchacherer
closed
1 day ago
1
pathology getting started notebook update
#73
DanielaSchacherer
closed
2 days ago
1
Investigate nbmake for testing
#72
fedorov
opened
3 weeks ago
0
fixed idc-index version
#71
DanielaSchacherer
closed
1 month ago
1
ENH: added new introductory notebook
#70
DanielaSchacherer
closed
1 month ago
1
Add analysis notebook using MCMICRO
#69
erindiel
opened
3 months ago
4
Add QuPath viewing notebook
#68
melissalinkert
closed
1 day ago
6
Add notebook with conversion examples
#67
erindiel
opened
3 months ago
6
Reviewed RMS notebook
#66
DanielaSchacherer
closed
3 months ago
1
Refinements for ISBI Tutorial
#65
DanielaSchacherer
closed
3 months ago
1
fix links and try to fix image preview
#64
fedorov
closed
3 months ago
1
Update getting started to use idc-index
#63
fedorov
closed
3 months ago
1
RMS notebook updates
#62
DanielaSchacherer
closed
3 months ago
7
Fixed spelling mistake in Colab link
#61
DanielaSchacherer
closed
3 months ago
1
Improvements to ISBI Tutorial
#60
DanielaSchacherer
closed
4 months ago
1
Added ISBI'24 Tutorial
#59
DanielaSchacherer
closed
4 months ago
1
Update on RMS annotation notebook
#58
DanielaSchacherer
closed
4 months ago
1
initial version SR annotations demo notebook
#57
fedorov
closed
4 months ago
1
Update colab images list
#56
github-actions[bot]
closed
4 months ago
0
Investigate why embedded viewer with HTML stopped working
#55
fedorov
opened
5 months ago
0
Update colab images list
#54
github-actions[bot]
closed
5 months ago
0
Update the gha message body while submitting the PR
#53
vkt1414
opened
7 months ago
0
Update colab images list
#52
github-actions[bot]
closed
7 months ago
4
WIP: fixing mhub notebook regression and simplifications
#51
fedorov
opened
7 months ago
3
IDC API colab submit
#50
bcli4d
closed
7 months ago
1
mhub notebook is broken
#49
fedorov
opened
7 months ago
0
Create keep-alive.yml
#48
vkt1414
closed
8 months ago
0
Fix github actions
#47
vkt1414
closed
7 months ago
1
/bin/bash: line 1: plastimatch: command not found
#46
TrinhNguyenP
opened
8 months ago
5
Add examples of using idc-index from R
#45
fedorov
opened
8 months ago
0
Updated README in pathomics folder with link to publication (instead of preprint)
#44
DanielaSchacherer
closed
10 months ago
0
add IDC MICCAI'23 tutorial MHub notebook
#43
fedorov
closed
10 months ago
1
more reorganization of the repo
#42
fedorov
closed
10 months ago
1
Reorganization and cleanup of the repository
#41
fedorov
closed
10 months ago
0
do not commit the updated papermill output notebooks
#40
fedorov
closed
10 months ago
0
lock python and pip package versions
#39
vkt1414
closed
10 months ago
1
A github actions workflow to test if getting_started colab notebooks running properly in latest colab docker runtime env.
#38
vkt1414
closed
10 months ago
3
Should we ignore the ERROR warning about pandas version in getting_started/part3_exploring_cohorts.ipynb?
#37
vkt1414
closed
11 months ago
3
Clean up notebook for IDC on AWS notebook
#36
flamingofugang
closed
11 months ago
1
Bump urllib3 from 1.26.7 to 1.26.18 in /scripts
#35
dependabot[bot]
closed
10 months ago
0
add IDC on AWS tutorial notebook
#34
flamingofugang
closed
11 months ago
1
Bump urllib3 from 1.26.7 to 1.26.17 in /scripts
#33
dependabot[bot]
closed
11 months ago
1
update segmentation primer notebook
#32
fedorov
closed
11 months ago
2
Add the Colab R test notebook
#31
denbonte
closed
11 months ago
5
install Plastimatch
#30
kiratben
closed
11 months ago
5
Bump certifi from 2022.12.7 to 2023.7.22 in /scripts
#29
dependabot[bot]
closed
1 year ago
0
Replace subversion with git --depth 1 for repository checkout
#28
mhalle
opened
1 year ago
2
Bump grpcio from 1.41.0 to 1.53.0 in /scripts
#27
dependabot[bot]
closed
1 year ago
0
Bump requests from 2.26.0 to 2.31.0 in /scripts
#26
dependabot[bot]
closed
1 year ago
0
Missing metadata tag
#25
bnmajor
closed
1 year ago
1
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