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JinmiaoChenLab
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GraphST
GNU Affero General Public License v3.0
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Error while importing GraphST, No module named 'ot'
#40
niklasbinder
opened
4 weeks ago
1
vertical and horizontal integration of multiple tissue slices
#39
huixiaaaa
opened
1 month ago
0
Normalization issue on Stereo-seq tutorial
#38
tvegawaichman
opened
1 month ago
0
Model Implementation Appears to Differ from Publication
#37
zdanaceau
opened
2 months ago
0
where can i get Mouse embryo dataset?
#36
amssljc
opened
2 months ago
1
Maximum number of cells tested by GraphST
#35
rocketeer1998
opened
3 months ago
1
specify batch size
#34
jairaj-mathur
opened
4 months ago
1
Email address update
#33
longyahui
opened
4 months ago
0
take 3D spots position into account
#32
wanghf810501
opened
5 months ago
1
Latent Representation for Silhouette Score to Determine Number of Clusters
#31
Radwaadel267
opened
5 months ago
6
Adaptation for VisiumHD?
#30
Rafael-Silva-Oliveira
closed
2 months ago
1
Question for integrating different sources of ST and scRNA-seq data
#29
Fanyu000
opened
6 months ago
2
Can GraphST be applied for merfish?
#28
Byronxy
opened
6 months ago
1
Use latent embeddings for clustering
#27
aelhossiny
opened
6 months ago
1
TypeError: invalid data type for einsum"
#26
aelhossiny
closed
6 months ago
1
No file as scalefactors_json.json
#25
mangochiral
opened
6 months ago
2
Question about why the cluster number is set to 22 when clustering the mouse embryo dataset
#24
tqwang743
opened
6 months ago
1
Question with mouse olfactory bulb Stereo-seq data
#23
zhaozhenxing0
opened
7 months ago
2
Does GraphST work on M2 Mac?
#22
dolchan
opened
7 months ago
2
why deconvolution for adata_sc?
#21
UnseenAnchor
opened
7 months ago
1
How to use mclust as clustering method
#20
ShaowenJ
opened
8 months ago
1
The lack of spatial location information in dataset
#19
tqwang743
opened
10 months ago
2
Question about learning the mapping matrix for scRNA-seq and ST data integration(equation 9 and 10 in paper)
#18
UnkownNames
opened
10 months ago
1
clustering bug
#17
wdb-web
opened
10 months ago
1
Question regarding normalization
#16
tvegawaichman
opened
11 months ago
3
Is mclust supposed to be slow?
#15
peterkilfeather
closed
11 months ago
0
GraphST with multiple samples, general question
#14
kguion1
opened
11 months ago
3
The reproduction results of the DLPFC dataset are inconsistent with those recorded in the paper
#13
JingofGao
opened
1 year ago
0
GraphST for horizontal integration
#12
ciciQ777
opened
1 year ago
2
Question Regarding Distance obsp
#11
tvegawaichman
opened
1 year ago
2
Question with horizontal integration
#10
RubyLiu-2
opened
1 year ago
1
Color error in sc.pl.embedding()
#9
Tripfantasy
closed
1 year ago
1
issues with installation
#8
JLiLab
opened
1 year ago
5
The different results when i tried to cluster DLPFC with GraphST
#7
tqwang743
closed
1 year ago
3
Question for hyperparameters
#6
zy-fang
closed
1 year ago
2
Cannot find file scalefactors_json.json when running tutorial 1.
#5
JINJINT
closed
1 year ago
2
Create LICENSE
#4
longyahui
opened
1 year ago
0
Question for Github Code License
#3
JianingYao
opened
1 year ago
1