LANL-Bioinformatics EDGE issues

LANL-Bioinformatics / EDGE

EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.

https://lanl-bioinformatics.github.io/EDGE/

GNU General Public License v3.0

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issues

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Unable to log into web account for EDGE

#65 rlahowetz2 closed 1 month ago
4
Replace Tomcat

#64 mflynn-lanl opened 1 year ago
0
Runs are failing with permission errors

#63 Stopi closed 1 year ago
4
Can't connect to database

#62 Stopi closed 1 year ago
2
Site-generated emails are not received by gmail users

#60 mflynn-lanl closed 1 year ago
2
Does command-line submission bypass the queue system on EDGE?

#57 aretchless closed 1 year ago
2
Feature request: Include project name when extracting reads mapped to reference

#56 aretchless closed 1 year ago
1
batch project submission skips projects if the name is repeated in the batch file

#55 aretchless closed 1 year ago
1
v2.4

#54 chienchi closed 3 years ago
0
edge taxonomy problem

#53 smlary closed 1 year ago
0
Edge

#52 smlary closed 1 year ago
5
Project list shows duplicates of public project if also shared

#51 mflynn-lanl closed 4 years ago
0
Inconsistent project name

#50 poeli closed 4 years ago
2
add google analytics

#49 mflynn-lanl closed 3 years ago
2
Make "additional options" within each module, regular color and not faded

#48 mshakya closed 4 years ago
0
edge-covid19: change "HOME" to "Genome Analytics HOME"

#47 mshakya closed 4 years ago
0
EDGE-COVID19: Change ABOUT to ABOUT EDGE COVID19

#46 mshakya closed 4 years ago
0
Count and report SNPs/variants by comparing consensus genome to reference genome

#45 mshakya closed 4 years ago
1
Show more relevant information in My Project List

#44 mshakya closed 3 years ago
1
EDGE-COVID19: In the results page, variant analysis always shows as "Auto"

#43 mshakya closed 4 years ago
3
EDGE-COVID19: Change "Login" to "Login/Sign up"

#42 mshakya closed 4 years ago
0
EDGE-COVID19: Remove or update `Alternative uploading methods` from "Upload files"

#41 mshakya closed 4 years ago
1
Change docker name for edge-covid19 from edge_ncov to edge-covid19.

#40 mshakya closed 4 years ago
0
Variant analyses is being skipped even when selected (EDGE-COVID19)

#39 mshakya closed 4 years ago
0
Issue with `reconfig` and rerunning project option

#38 mshakya closed 4 years ago
0
"Ready to Submit" button is not always present in results page

#37 mshakya closed 4 years ago
2
Batch submission of SRA projects

#36 mshakya closed 3 years ago
0
Add contact info at the bottom of the page

#35 mshakya closed 4 years ago
1
Fresh EDGE Install Issues

#34 loganvoegtly opened 4 years ago
1
Question: How did you created the UI?

#33 hieplpvip closed 4 years ago
1
Loading files

#32 kmmoll opened 6 years ago
1
Data migration during updates in docker

#31 mattjmeier closed 6 years ago
6
Syntax for batch submissions with multiple single end files

#30 mattjmeier closed 6 years ago
2
How to sync NCBI_Genomes with ref_list.json file?

#29 mattjmeier closed 6 years ago
2
Manual entry for quality score encoding

#28 mattjmeier closed 6 years ago
3
getreadsbytaxa when custom DB is used

#27 donutbrew closed 6 years ago
3
null characters in config.txt

#26 donutbrew closed 6 years ago
1
bowtie2 alignment mode

#25 donutbrew closed 6 years ago
1
Variable typos in index/edge_config.tmpl (dev)

#24 donutbrew closed 6 years ago
1
Reconfig Project (dev) unpredectable

#23 donutbrew closed 4 years ago
0
NCBI Genomes vs Taxonomy

#22 donutbrew closed 6 years ago
3
microbial_profiling diamond issue

#21 donutbrew closed 6 years ago
1
ProjectComparison Path bug

#20 donutbrew opened 7 years ago
1
Incorrect percentages reported

#19 donutbrew closed 7 years ago
2
Reconfig project does not pull in all data

#18 donutbrew closed 6 years ago
1
Processes reporting as "failed"

#17 donutbrew opened 7 years ago
1
prokka contig name length error

#16 donutbrew closed 7 years ago
3
Free memory calculation on CentOS 7

#15 donutbrew closed 8 years ago
3
created functionality to rename projects and descriptions

#14 miller-n closed 8 years ago
0
Metadata

#13 chienchi closed 8 years ago
0