issues
search
LCSB-BioCore
/
FBCModelTests.jl
Tests for constraint-based metabolic models
https://lcsb-biocore.github.io/FBCModelTests.jl/stable/
Apache License 2.0
6
stars
5
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
make the footgun a little more obvious
#85
exaexa
opened
7 months ago
0
bump CI, use cache action
#84
exaexa
opened
11 months ago
0
make a note about how to use the docker containers in podman and galaxy
#83
exaexa
closed
11 months ago
1
parallelization params to run-frog
#82
mihai-sysbio
opened
1 year ago
1
Remove `parse_annotations`
#81
stelmo
opened
1 year ago
1
CompatHelper: add new compat entry for DelimitedFiles at version 1, (keep existing compat)
#80
github-actions[bot]
closed
1 year ago
1
Reaction duplication ignores directionality
#79
stelmo
opened
1 year ago
0
Add more SBO annotation tests
#78
stelmo
opened
1 year ago
0
Metabolite duplication is too sensitive
#77
stelmo
closed
1 year ago
1
Small cosmetic fixes for Memote.jl
#76
stelmo
closed
1 year ago
9
allow "evaluated" explanations in `@atest`
#75
exaexa
closed
1 year ago
2
Truncate memote test output
#74
stelmo
closed
1 year ago
5
Make test output neater
#73
exaexa
closed
1 year ago
1
clean up gitignore
#72
exaexa
closed
1 year ago
0
Improve to readme for the MEMOTE additions
#71
stelmo
closed
1 year ago
5
Improve memote.jl
#70
stelmo
closed
1 year ago
9
FROG: put report files into a separate OMEX subdir
#69
exaexa
closed
1 year ago
0
Improve the comparison tooling
#68
exaexa
closed
1 year ago
2
`fbcmt-compare-frog` should take tolerance parameters from the commandline
#67
exaexa
closed
1 year ago
1
finally fix the flux-in-variability check
#66
exaexa
closed
1 year ago
1
implement a small OMEX packer
#65
exaexa
closed
1 year ago
0
Add @kwdef to constructors
#64
stelmo
closed
1 year ago
1
Fix flux column in `02_fva.tsv`
#63
exaexa
closed
1 year ago
1
update the frog report format to 0.1.2
#62
exaexa
closed
1 year ago
0
usability questions
#61
mihai-sysbio
opened
1 year ago
10
Add commandline FROG interface and a straightforward dockerized FROG runner
#60
exaexa
closed
1 year ago
1
do not throw on loading less-than-fatally-broken SBML
#59
exaexa
closed
1 year ago
1
frog: standardize the tolerance computation
#58
exaexa
closed
1 year ago
0
include ccov badge
#57
exaexa
closed
1 year ago
0
Sync FROG output with the latest spec, support solver modifications
#56
exaexa
closed
1 year ago
0
fix output of empty tables in FROG
#55
exaexa
closed
1 year ago
1
Extend memote tests to include purposefully broken (or fixed) models
#54
stelmo
closed
1 year ago
3
some frontend improvements
#53
exaexa
closed
1 year ago
1
Group FVA in tests
#52
stelmo
closed
1 year ago
1
use `Base.@kwdef` for setting up defaults for constant-holding structures
#51
exaexa
closed
1 year ago
2
added memote consistency tests
#50
Fl-Sch
closed
1 year ago
5
TagBot trigger issue
#49
JuliaTagBot
closed
1 year ago
8
add logos
#48
exaexa
closed
1 year ago
0
strip now-unnecessary prefix from frog functions
#47
exaexa
closed
1 year ago
2
add julia compat
#46
exaexa
closed
1 year ago
0
add tagbot action
#45
exaexa
closed
1 year ago
0
Reorganize the memote tests
#44
stelmo
closed
1 year ago
3
frog modularization & testing
#43
exaexa
closed
1 year ago
1
verify SHA of all downloaded test files
#42
exaexa
closed
1 year ago
1
Re-organize package into module structure
#41
stelmo
closed
1 year ago
3
Investigate problem with reaction annotation regexes
#40
stelmo
closed
1 year ago
5
Organize tests into modules to make finding them easier from the repl
#39
stelmo
closed
1 year ago
1
Add additional tests
#38
stelmo
closed
1 year ago
4
Add memote test suite
#37
stelmo
closed
1 year ago
3
improve the no-op report from autoformatter
#36
exaexa
closed
1 year ago
1
Next