LPDI-EPFL masif issues - Githubissues

LPDI-EPFL / masif

MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.

Apache License 2.0

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issues

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Cannot download large PDB structures

#30 tristanbrown opened 3 years ago
0
Reduce versus Open Babel for Protonation

#29 giavaneerspublicprojects closed 3 years ago
1
Error handling: missing atoms when calculating hydrogen-bonding potential

#28 jomimc closed 3 years ago
1
Ever considered changing the hydrophobicity scale?

#27 jomimc closed 3 years ago
1
Masif_ppi_search output

#26 abbynewbury opened 3 years ago
3
dockerfile does not work

#25 heiidii closed 3 years ago
1
Unexpected Errors second stage alignment

#24 abdullahbilalawan opened 3 years ago
3
MaSIF v2 source code

#23 agamemnonc closed 3 years ago
6
Remove tmp files when preparing data

#22 mpdprot closed 3 years ago
2
How can I get ground truth?

#21 ElvisRain opened 3 years ago
1
Missing lower bound in normalize_electrostatics

#20 vsomnath closed 3 years ago
1
Meaning of mask in precomputed numpy arrays

#19 stebliankin closed 3 years ago
1
Recommended args for masif-search are not correct

#18 mpdunne opened 3 years ago
2
Steps 2 and 3 missing in data_preparation?

#17 mpdunne closed 3 years ago
2
The provide docker file do not support tensorflow GPU

#16 zshyang closed 3 years ago
3
Question regarding PyMOL plugin

#15 zshyang opened 3 years ago
14
How to install reduce(3.23)

#14 zshyang closed 3 years ago
3
pdl1_benchmark do not predict interface between 4ZQK_A and 4ZQK_B

#13 stebliankin closed 3 years ago
5
Problems when extracting chains from PDB files

#12 jomimc closed 3 years ago
1
Masif_pymol_plugin erorr

#11 abbynewbury closed 3 years ago
1
Error while running on a predicted structure

#10 skyungyong closed 4 years ago
2
Getting "docked" coordinates from masif_ppi

#9 SenyorDrew closed 4 years ago
1
second_stage_alignment_nn.py error

#8 AthenACHY closed 4 years ago
2
Lot of variation in masif_ppi_search outputs?

#7 av1659 closed 4 years ago
2
Pdl1 benchmark looking for masif_opts["coord_dir_npy"]

#6 av1659 closed 4 years ago
13
Masif nomatlab

#5 pablogainza closed 4 years ago
0
length assert error while run data_prepare_one.sh 1MBN_A_ under folder data/masif_site

#4 Mathlida closed 4 years ago
0
step 1 download pdf failed

#3 billryan closed 4 years ago
2
Patch extraction

#2 LivC193 closed 4 years ago
1
Pockets

#1 ghost closed 5 years ago
1