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Lioscro / alaska-parse

Automated and friendly RNA-seq analysis (migrated to Parse Server)
http://alaska.caltech.edu
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automation docker docker-compose kallisto parse-server pipeline python3 rna-seq rna-seq-analysis rna-seq-pipeline rna-sequencing sleuth

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Alaska: Automated and friendly RNA-seq analysis

Version: v1.7.2

RNA-sequencing (RNA-seq) provides a way to quantify differential gene expression and is used to discover novel gene functions and pathways. Although the molecular biology behind RNA-seq is fully understood, analysis of the data remains a significant bottleneck. Here, we introduce a RNA-seq framework that will allow analysis within hours of an RNA-seq experiment.