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MPI-Dortmund
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tomotwin-cryoet
cryo-ET particle picking by representation and metric learning
Mozilla Public License 2.0
32
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6
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CUDA Triton Error - Device Kernel is invalid
#114
NoahHenrikKleinschmidt
opened
2 weeks ago
0
Tomogram not aligned with .temb file
#113
lgomez21
opened
3 weeks ago
0
change default neighbors to 64
#112
thorstenwagner
closed
1 month ago
1
Update cuml and pandas
#111
thorstenwagner
closed
1 month ago
0
Needs help even to reproduce tutorial
#110
kimdn
opened
1 month ago
2
IndexError: Boolean index has wrong length
#109
pankajumich
opened
1 month ago
6
[Question] Can I install tomotwin without pip?
#108
kimdn
opened
1 month ago
1
[Request] save tomotwin result files in float32
#107
kimdn
opened
1 month ago
1
Making turning a segmentation into a binary mask
#106
hamid13r
closed
1 month ago
1
Update torchtrainer.py
#105
YousefMetwally
closed
1 month ago
0
Update installation.rst
#104
YousefMetwally
closed
5 months ago
1
Single forward run for embedding of anchor, negative and positive volumes.
#103
YousefMetwally
closed
5 months ago
1
Auto encoder
#102
YousefMetwally
closed
5 months ago
0
environment creation command in docs doesn't work
#101
alisterburt
closed
5 months ago
3
Issue with environment creation
#100
alisterburt
closed
1 month ago
3
Update installation.rst
#99
YousefMetwally
closed
6 months ago
0
Update changes link
#98
thorstenwagner
closed
6 months ago
0
Update to napari 0.5.4
#97
thorstenwagner
closed
1 month ago
1
Switch to SPDX-License-Identifiers
#96
kephale
closed
8 months ago
1
Adjusting license headers
#95
kephale
closed
8 months ago
2
Update documentation to cover new napari-tomotwin features
#94
thorstenwagner
closed
1 month ago
1
Reduce number of forward passes during training for speed-up
#93
thorstenwagner
closed
1 month ago
1
Use dask to speed-up the locate command
#92
thorstenwagner
closed
7 months ago
0
Remove tomotwin from env file
#91
thorstenwagner
closed
9 months ago
0
Locate is now using dask
#90
thorstenwagner
closed
9 months ago
1
Fast locate, new rapdis and updated tutorial
#89
thorstenwagner
closed
7 months ago
2
Update to Rapids 23.12
#88
thorstenwagner
closed
7 months ago
0
Update pytorch-metric-learning
#87
thorstenwagner
closed
9 months ago
1
Label mask is not specificed
#86
DrJesseHansen
closed
1 month ago
12
UMAP manifold error
#85
ffigueiredo85
closed
9 months ago
13
Release v0.8.0
#84
thorstenwagner
closed
11 months ago
2
About Model Training and Loss Function
#83
JachyLikeCoding
opened
11 months ago
3
Write umap embeddings metadata + positions into umap attrs and remove label mask calculation
#82
thorstenwagner
closed
11 months ago
1
add short training tutorial
#81
thorstenwagner
closed
11 months ago
1
Inquiry Regarding Model Training and Resource Requirements
#80
JachyLikeCoding
closed
11 months ago
2
fix numbering
#79
GavinR1
closed
12 months ago
0
Stop making tomotwin_tools crash on non gpu machines.
#78
thorstenwagner
closed
12 months ago
1
TomoTwin_tools loads all tool dependencies
#77
GavinR1
closed
12 months ago
1
Add median filter strategy
#76
GavinR1
closed
12 months ago
2
napari_boxmanager by x-windows
#75
kimdn
closed
9 months ago
2
CUDA/torch error since updating to 0.7.0
#74
rdrighetto
closed
11 months ago
10
Install tomotwin by mamba
#73
kimdn
closed
1 year ago
3
Check if ldconfig is in path
#72
thorstenwagner
opened
1 year ago
0
add links to strategies
#71
thorstenwagner
closed
1 year ago
0
Adds an images to strategies
#70
thorstenwagner
closed
1 year ago
1
Link strategies in tutorial
#69
thorstenwagner
closed
1 year ago
0
make headlines
#68
thorstenwagner
closed
1 year ago
0
This PR adds strategies to the documentation
#67
thorstenwagner
closed
1 year ago
1
Add fast median mask estimation
#66
thorstenwagner
closed
1 year ago
1
Fix padding when creating heatmaps during locate with `--write_heatmaps`
#65
thorstenwagner
closed
1 year ago
1
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