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MarioniLab
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FurtherMNN2018
Code for further development of the mutual nearest neighbours batch correction method, as implemented in the batchelor package.
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VariableFeatures function in Seurat v4
#15
ahassien
closed
2 years ago
4
Error with using fastMNN
#14
Zifeng-L
opened
4 years ago
1
Error when integrating multiple samples
#13
Chenmengpin
opened
4 years ago
1
The code cannot run
#12
yzcv
closed
3 years ago
1
error when gene dimension is high : stop("infinite or missing values in 'x')
#11
MengQiuchen
closed
4 years ago
6
Data downloading
#10
wenbostar
closed
5 years ago
18
Add check to avoid bad behaviour with no batch effect
#9
LTLA
closed
5 years ago
0
Question about "pancreas/prepareData.R"
#8
ssscj
closed
5 years ago
3
aybe there is a bug in the
#7
daydreamersun
closed
5 years ago
0
Do I need do mnn correct again after subset data?
#6
zacharylau10
closed
5 years ago
5
Could I export the MNN corrected dataset matrix for downstream analysis?
#5
sunkh1026
closed
5 years ago
4
Is MNN suitable for TPM or CPM? How to set the value of k?
#4
yhting
closed
6 years ago
4
Question about "droplet/prepareData.R"
#3
sunkh1026
closed
6 years ago
1
The mkdir command is missing for the download_data.sh in haematopoiesis folder
#2
mt1022
closed
6 years ago
3
TODO: add a description and motivation for the algorithm
#1
LTLA
closed
6 years ago
1