NIEHS PrestoGP issues - Githubissues

NIEHS / PrestoGP

Penalized Regression on Spatiotemporal Outcomes using Gaussian Processes a.k.a. PrestoGP

https://niehs.github.io/PrestoGP/

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Observation-level lod, imputation tests, updated README

#60 sciome-bot closed 2 months ago
0
Update README.md and GH-page logo

#59 kyle-messier closed 2 months ago
0
update readme to PrestoGP- local badge coverage

#58 kyle-messier closed 2 months ago
0
Update test-coverage.yaml

#57 kyle-messier closed 2 months ago
0
Implement imputation beta

#56 sciome-bot closed 2 months ago
1
update README with critical functionality

#55 kyle-messier opened 3 months ago
1
Intercept not calculated when estimating yhat's

#54 ericbair-sciome opened 3 months ago
1
Segfault with OpenBLAS Warning

#53 sigmafelix closed 3 months ago
2
Vignette is causing R CMD check to fail

#52 ericbair-sciome closed 4 months ago
1
Pull request #37: Added documentation. Added RandomFields data sets. Fixed R CMD issues

#51 sciome-bot closed 4 months ago
5
Testing for binomial models

#50 ericbair-sciome closed 4 months ago
2
Input checking needed for all user-facing methods

#49 ericbair-sciome opened 5 months ago
0
Show/accessor methods need to be updated (or created)

#48 ericbair-sciome opened 5 months ago
2
Duplicated locs can cause numeric issues

#47 ericbair-sciome closed 4 months ago
2
Fix tests. Fix linting issues. Added release action.

#46 sciome-bot closed 5 months ago
20
Github Releases - Enable Read/Write permissions for Actions

#45 sciome-bot closed 5 months ago
1
Sciome Update 1/10/2024

#44 ericbair-sciome closed 5 months ago
2
prestogp_fit fails for non-default values of covparams

#43 ericbair-sciome closed 5 months ago
1
No prediction methods for full models

#42 ericbair-sciome opened 6 months ago
1
Code for univariate models needs to be updated

#41 ericbair-sciome closed 5 months ago
2
Max-min ordering and nearest neighbor calculation could be optimized

#40 ericbair-sciome opened 6 months ago
2
Sciome update: sparseNN bug fix and new tests

#39 ericbair-sciome closed 5 months ago
0
sparseNN produces incorrect nearest neighbors in some cases

#38 ericbair-sciome closed 5 months ago
2
Vecchia likelihood is inaccurate when submatrices are numerically singular

#37 ericbair-sciome opened 7 months ago
0
Latest Sciome update: likelihood bug fix and additional testing

#36 ericbair-sciome closed 7 months ago
1
Correlation distance

#35 ericbair-sciome opened 7 months ago
1
Users should be able to fix specified parameters

#34 ericbair-sciome opened 7 months ago
0
Multivariate estimate_betas method should fit a separate model for each outcome

#33 ericbair-sciome closed 3 months ago
4
prestogp_fit does not allow one to specify a distance function

#32 ericbair-sciome opened 7 months ago
1
Pass parameters to rdist

#31 ericbair-sciome opened 7 months ago
1
Make compatible with sf package

#30 ericbair-sciome opened 7 months ago
0
estimate_betas should allow alternative penalties

#29 ericbair-sciome opened 7 months ago
4
bigmemory (or similar method) for large matrix storage

#28 ericbair-sciome opened 7 months ago
3
Input validation is inadequate for multivariate models

#27 ericbair-sciome closed 5 months ago
1
Full multivariate model not implemented

#26 ericbair-sciome opened 7 months ago
0
Multivariate Matern covariance penalties

#25 ericbair-sciome opened 7 months ago
1
Relaxed lasso

#24 ericbair-sciome opened 7 months ago
1
Consolidate spatial/spatiotemporal functions

#23 ericbair-sciome closed 5 months ago
1
Evaluate the effect of initial theta estimates

#22 ericbair-sciome opened 7 months ago
2
Imputation functionality

#21 ericbair-sciome opened 7 months ago
6
testthat tests

#20 ericbair-sciome closed 5 months ago
2
Documentation needed for core PrestoGP functions

#19 ericbair-sciome closed 4 months ago
1
Full likelihood is not matching the Vecchia likelihood in some cases

#18 ericbair-sciome closed 7 months ago
2
GitHub Action yaml, badges, and rules

#17 kyle-messier closed 7 months ago
4
Create lint.yaml

#16 kyle-messier closed 7 months ago
0
Update check-standard.yaml to multiple OS

#15 kyle-messier closed 7 months ago
5
Repository restructuring -- combining with PrestoGP_Pesticides

#14 sigmafelix opened 8 months ago
0
Topographic Wetness Index - Covariate Calculation

#1 kyle-messier opened 8 months ago
5
Geochemical properties -- Covariate calculation

#2 sigmafelix opened 9 months ago
1
Soil survey -- covariate calculation

#3 sigmafelix opened 9 months ago
2