National-COVID-Cohort-Collaborative Data-Ingestion-and-Harmonization issues

National-COVID-Cohort-Collaborative / Data-Ingestion-and-Harmonization

Data Ingestion and Harmonization

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issues

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Request to add the MeSH term in the OMOP vocabulary tables used in N3C

#125 stephanieshong opened 3 days ago
1
OHDSI Vocabulary maps certain procedures in to visit domain. Include these data elements into the visit domain.

#124 stephanieshong opened 1 week ago
0
CMS: N3C PPRL linked person IDs have multiple CMS IDs. ( Medicaid and Medicare)

#123 stephanieshong closed 7 months ago
7
CMS: Medicare and Medicaid - drug_expoure domain data should have overlapping data with EHR as well as additional data from CMS for PPRL linked person

#122 stephanieshong opened 8 months ago
2
CMS - Medicare and Medicaid : Need to update the provider characterization files using the newer version of the Compendium file.

#121 stephanieshong closed 7 months ago
3
crosswalks impacted by possible bad relationships in OMOP concept_ancestor table.

#120 chrisroederucdenver opened 8 months ago
1
Assess the current state of OMOP pipeline with non-standard concepts prior to OMOP pipeline updates

#119 stephanieshong closed 7 months ago
6
CMS DQP Query - how much more data are we adding to the PPRL-linked person from CMS(Medicaid and Medicare)

#118 stephanieshong closed 7 months ago
2
OMOP pipeline update to support non-standard to standard map using the latest version of the OMOP vocabulary table

#117 stephanieshong opened 10 months ago
9
PCORnet pipeline updates to support CDM v6.1 changes

#116 stephanieshong closed 7 months ago
6
CMS DQP : PPRL linked Cohort visits and domain count comparison

#115 stephanieshong closed 7 months ago
8
CMS: Medicaid - 196 person have multiple race values and 692 multiple ethnicity values

#114 stephanieshong closed 11 months ago
1
CMS: Medicare and Medicaid - ED to inpatient visit or Inpatient visit based on the revenue codes

#113 stephanieshong opened 11 months ago
0
CMS: Medicare and Medicaid - Episode of Care

#112 stephanieshong opened 11 months ago
2
CMS: Medicaid - LT visits needs to merge visit dates with 1 day differences as one

#111 stephanieshong closed 7 months ago
7
CMS: Medicare - Visit_detail rollup to visit_occurrence - SN visits needs to merge dates with 1 day differences as one

#110 stephanieshong closed 7 months ago
24
CMS : Medicare and Medicaid- Refine macro visit - make changes such that it adhere close to N3C macro visit - limit to inpatient visit types

#109 stephanieshong opened 11 months ago
0
CMS : Medicare and Medicaid - governance decision- remove never events from the staging datasets

#108 stephanieshong closed 7 months ago
2
CMS: Medicare - low number of Durable Medical Equipment is getting to the staging dataset

#107 stephanieshong closed 11 months ago
1
CMS : medicaid - low number of outpatient visit is detected

#106 stephanieshong closed 11 months ago
1
unit string for gram per deciliter

#105 stephanieshong closed 1 year ago
1
Add CI checks for SSSOM mapping sets in mapping commons

#104 matentzn opened 1 year ago
0
CMS -medicaid - some claimno are associated with multiple patients.

#103 stephanieshong closed 7 months ago
2
person contains multiple addresses in cms claims source. Is there a column we can reference to select the most recent one?

#102 stephanieshong closed 1 year ago
2
CMS: Medicaid - two difference race value exist per person in CMS data which is causing dups in person table

#101 stephanieshong closed 7 months ago
3
Update README.md

#100 kbradwell closed 1 year ago
1
Update README.md

#99 kbradwell closed 1 year ago
0
Update README.md

#98 kbradwell closed 1 year ago
0
all changes for v2/unit-harmonization-and-inference

#97 kbradwell closed 1 year ago
0
Update README.md

#96 kbradwell closed 1 year ago
0
Create README.md

#95 kbradwell closed 1 year ago
0
Create README.md

#94 kbradwell closed 1 year ago
0
Delete pipeline_logic/v2/unit-harmonization/conversionsLib directory

#93 kbradwell closed 1 year ago
0
Delete pipeline_logic/v2/unit-harmonization/Unit-Standards directory

#92 kbradwell closed 1 year ago
0
Support string type for the NLP datasets ids

#91 stephanieshong closed 1 year ago
2
Provide a hot fix to address OMOP Vocab bug for COVID Visit(HCPCS code 704057 ) mapped to COVID dx in condition

#90 stephanieshong closed 1 year ago
4
duplicate rows are found in the control_map datasets

#89 stephanieshong closed 1 year ago
2
Make control_map dataset available from the data catalogue.

#88 stephanieshong closed 1 year ago
3
two different ADTEvent at the same date and time for the same person and encounter should be flagged as duplicate.

#87 stephanieshong closed 2 years ago
3
some site is submitting SDoH concepts in LOINC as well as in SNOMED. And the SNOMED the answers can be in both numerical as well as categorical

#86 stephanieshong opened 2 years ago
0
some sites are sending true for the long covid flag in TriNetX CDM instead of t as specified -support both flavors

#85 stephanieshong closed 2 years ago
1
SDoH answer codes can be submitted in multiple flavors, i.e. LOINC:LA prefix or LA prefix

#84 stephanieshong closed 2 years ago
3
Map Oxygenation and ventilator data to device_exposure for three CDM sources

#83 stephanieshong closed 2 years ago
8
need to re-map preceding_visit_occurrence_id in visit_occurrence and in visit_detail domain.

#82 stephanieshong closed 2 years ago
1
Add logic to support SDoH concept's categorical answer code map.

#81 stephanieshong closed 2 years ago
5
ADT data coming in from the source CDM should be mapped to VISIT_DETAIL domain

#80 stephanieshong closed 2 years ago
8
NOTE and NOTE_NLP dataset are being submitted by all CDMs. Need to process them and add them to the Data Catalog

#79 stephanieshong closed 1 year ago
2
ACT CDM : long-COVID clinic visit data in ACT CDM is submitted via the observation_fact table. Add logic to handle this specialty clinic visit data.

#78 stephanieshong closed 2 years ago
4
In TriNetX CDM: long covid clinic visit flag is set in a new column in encounter, "is_long_covid", new logic need to be added to process this data.

#77 stephanieshong closed 2 years ago
1
We are receiving immunization data with NDC code type that is not found in OMOP Vocabulary tables

#76 stephanieshong closed 11 months ago
2