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Neural-Systems-at-UIO
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nutil
https://nutil.readthedocs.io/en/latest/
GNU General Public License v3.0
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Transform issue - some images fail to rotate
#269
sharoncy
closed
2 years ago
11
Review/ revise the warning messages
#268
sharoncy
closed
11 months ago
1
Unknown issue with running dataset in Quantifier
#267
ingvildeb
closed
2 years ago
4
Custom_report_colors.csv
#266
sharoncy
closed
11 months ago
0
nutil demo
#265
Majpuc
closed
11 months ago
0
Python plots
#264
sharoncy
opened
2 years ago
1
Support for QCAlign CustomRegion.txt file
#263
sharoncy
closed
11 months ago
1
floats suck
#262
Tevemadar
closed
2 years ago
0
Disable or fix the Nifti feature in Nutil
#261
sharoncy
closed
2 years ago
1
Wrong directory for custom regions file: no error message
#260
ingvildeb
opened
2 years ago
0
Update automatic validator datasets for Nutil
#259
sharoncy
closed
2 years ago
2
Update Help text in Nutil
#258
sharoncy
closed
2 years ago
1
Support for coordinates that reflect nonlinear anchoring based on VisuAlign
#257
sharoncy
closed
11 months ago
2
Stop in Nutil leads to crash
#256
sharoncy
closed
2 years ago
1
Crashing when trying to process multiple sections (possibly due to RAM?)
#249
jaimemcc
closed
1 year ago
4
VisuAlign support
#248
Tevemadar
closed
2 years ago
0
Implement support for CustomRegion file in .txt format
#247
sharoncy
closed
2 years ago
6
Issue with Tiff creator from untiled Tiff to tiled Tiff
#246
Majpuc
closed
2 years ago
3
3-channel fluorescent images - support for identical autocropping
#245
sharoncy
opened
2 years ago
1
Implement support in NutilWeb for WebAlign .json file structure.
#244
sharoncy
closed
11 months ago
3
Nutil coordinate output: add reference atlas version to the json descriptor.
#243
sharoncy
closed
1 year ago
3
Improve Read the Doc - Nutil coordinates do not take into account nonlinear transformation
#242
sharoncy
closed
2 years ago
3
Improve error messaging for Nutil Quantifier initiated with command line script
#241
sharoncy
closed
11 months ago
1
Add regions outside the allen atlas
#240
namercer
closed
2 years ago
5
Object report sorted by custom regions
#239
ingvildeb
closed
2 years ago
12
Add info about segmentation size restriction in ReadtheDoc
#238
sharoncy
closed
2 years ago
1
Expand info about the NUT file to the ReadtheDocs
#237
sharoncy
closed
2 years ago
3
Automatic validator - suggestion
#236
sharoncy
closed
11 months ago
1
custom mask color in the nut file
#235
Majpuc
closed
3 years ago
6
Create ground truth dataset for WHS
#234
sharoncy
closed
3 years ago
1
update atlas citation text in Nutil GUI and readthedocs
#233
Majpuc
closed
3 years ago
1
Add a error message if users pick the wrong atlas version in Nutil Quantifier
#232
Majpuc
closed
3 years ago
1
Nutil release week 41_add warning text
#231
Majpuc
closed
3 years ago
2
Add info about the file called segmentation in QNII output _ readsthedocs
#230
Majpuc
closed
3 years ago
1
Improve the "how to interpret the output" section in the readthedoc.
#229
sharoncy
closed
2 years ago
1
Bug in Nutil v0.6.6
#228
sharoncy
closed
3 years ago
4
Object splitting - improve the documentation
#227
sharoncy
closed
3 years ago
1
Nutil Quantifier v0.6.0 - Object count N/A
#226
anhknguyen96
closed
3 years ago
6
Nutil Quantifier 0.6.6 is not running with WHSv3
#225
Majpuc
closed
3 years ago
4
Problem with Atlas maps output with WHSv3
#224
Majpuc
closed
3 years ago
3
"Root"
#223
sharoncy
opened
3 years ago
1
Reconsider wording: "WARNING: Some of the area matrices were not initialized"
#222
sharoncy
closed
2 years ago
2
Error in per slice reference region quantification
#221
briannnagurdon
closed
3 years ago
5
Resize error message
#220
sharoncy
closed
3 years ago
1
How to get brain areas of bregma-coordinates of the Nutil Quantifier output file
#219
Wissewald
closed
3 years ago
2
Make documentation publicly available with spinx and readthedocs
#218
sharoncy
closed
3 years ago
2
Mirror code repository to EBRAINS gitlab
#217
sharoncy
closed
3 years ago
1
Unexisting objects detected at the edge of the image
#216
Wissewald
closed
3 years ago
1
WHSv3 atlas region error in Quantifier output
#215
Majpuc
closed
3 years ago
3
Wrong rat brain area labelling after running the QUINT-workflow with the WHSRat-v3-atlas
#214
Wissewald
closed
3 years ago
7
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