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PEtab-dev
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libpetab-python
Python package for working with PEtab files
https://libpetab-python.readthedocs.io
MIT License
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Fix PySBModel.get_parameter_value
#203
dweindl
closed
1 year ago
1
Fix sympy symbol name clashes
#202
dweindl
closed
1 year ago
1
Release 0.2.0
#201
dweindl
closed
1 year ago
1
Require Python 3.9
#200
dweindl
closed
1 year ago
3
Simulator: rename measurement column to simulation
#199
dilpath
closed
1 year ago
6
Calculation of LLH in `calculate_llh` / `calculate_single_llh`
#198
fbergmann
closed
1 year ago
2
petab.get_model_for_condition may remove rateRules where it shouldn't
#197
dweindl
opened
1 year ago
0
Add pyproject.toml
#196
dweindl
closed
1 year ago
0
Fix test suite branch / path
#195
dweindl
closed
1 year ago
1
Fix get_model_for_condition
#194
dweindl
closed
1 year ago
1
prevent strings being parsed as nan in get_visualization_df
#193
plakrisenko
closed
1 year ago
1
add goodness of fit plot
#192
plakrisenko
closed
1 year ago
1
add histogram to residuals plot and center zero
#191
plakrisenko
closed
1 year ago
1
CODEOWNERS
#190
dweindl
closed
1 year ago
1
Handle yValues default in vis validation
#189
dweindl
closed
1 year ago
1
Startpoints as dict
#188
dweindl
closed
1 year ago
0
Residuals plot
#187
plakrisenko
closed
1 year ago
1
GHA: Replace deprecated `set-output`
#186
dweindl
closed
1 year ago
1
Vis: Don't fail on missing simulations
#185
dweindl
closed
1 year ago
1
Add validation for visualization files
#184
dweindl
closed
1 year ago
1
Release 0.1.30
#183
dweindl
closed
1 year ago
1
Move tests to tox
#182
yannikschaelte
closed
1 year ago
1
Update deprecated functions in tests
#181
yannikschaelte
closed
1 year ago
1
Fix deprecated tight layout matplotlib
#180
yannikschaelte
closed
1 year ago
0
Use petab identifier for combine archives
#179
fbergmann
closed
1 year ago
0
Add petab.Problem.__str__
#178
dweindl
closed
1 year ago
1
Fix test dependencies: scipy
#177
dweindl
closed
1 year ago
1
Incorrect check in linter on transformed parameter bounds
#176
matthiaskoenig
closed
1 year ago
8
Vis: Handle missing data more gracefully
#175
dweindl
closed
1 year ago
1
Release 0.1.29
#174
dilpath
closed
1 year ago
0
Fix relative paths for model files
#173
dilpath
closed
1 year ago
1
Simplification of PEtab problems
#172
dweindl
closed
1 year ago
1
Method to unflatten simulation df produced by flattened PEtab problem
#171
dilpath
closed
1 year ago
1
Release 0.1.28
#170
dweindl
closed
1 year ago
1
Fix deprecation warning from `get_model_for_condition`
#169
dweindl
closed
1 year ago
1
Fix SBML validation
#168
dweindl
closed
1 year ago
1
`log_sbml_errors` ignores error severity
#167
FFroehlich
closed
1 year ago
0
model.is_valid logs sbml errors twice
#166
FFroehlich
closed
1 year ago
0
Fix typehints and deprecation warning
#165
dweindl
closed
1 year ago
0
incorrect deprecation warning
#164
FFroehlich
closed
1 year ago
0
Various cleanup
#163
dweindl
closed
1 year ago
1
Python support policy
#162
dweindl
closed
1 year ago
1
Fix validation for output parameters columns in the condition table
#161
dweindl
closed
1 year ago
0
Release 0.1.27
#160
dweindl
closed
1 year ago
1
Argument forwarding for Problem.get_optimization_to_simulation_parameter_mapping
#159
dweindl
closed
2 years ago
1
Drop Python 3.7 support?
#158
dweindl
closed
1 year ago
3
Fix reading multiple parameter subset files from YAML
#157
dilpath
closed
2 years ago
0
Fix use of multiple parameter files
#156
m-philipps
closed
2 years ago
0
Develop
#155
m-philipps
closed
2 years ago
0
Parameters dropped when using subset parameter files
#154
m-philipps
closed
2 years ago
0
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