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PEtab-dev
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libpetab-python
Python package for working with PEtab files
https://libpetab-python.readthedocs.io
MIT License
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Doc: Exclude private members
#253
dweindl
closed
2 months ago
1
maint: fix code style, check on gha
#252
dweindl
closed
2 months ago
1
maint: black -> ruff
#251
dweindl
closed
2 months ago
1
Typehint states it is optional, but no default value is provided.
#250
PaulJonasJost
closed
3 months ago
1
Release 0.2.9
#249
dweindl
closed
4 months ago
0
Fix `SbmlModel.get_free_parameter_ids_with_values` to handle InitialA…
#248
dweindl
closed
4 months ago
5
Wrong plot_goodness_of_fit if different order of rows in measurement_df and simulation_df
#247
plakrisenko
opened
4 months ago
1
Fix pytest.PytestRemovedIn9Warning / Marks applied to fixtures
#246
dweindl
closed
5 months ago
0
Release 0.2.8
#245
dweindl
closed
5 months ago
1
Require pyarrow
#244
dweindl
closed
5 months ago
1
Add petab.Problem.n_{estimated,measurements,priors}
#243
dweindl
closed
5 months ago
1
Fix pandas FutureWarning in petab/visualize/lint.py
#242
dweindl
closed
6 months ago
1
petab/visualize/lint.py pandas FutureWarning
#241
dweindl
closed
5 months ago
0
Release 0.2.7
#240
dweindl
closed
6 months ago
0
Fix flatten_timepoint_specific_output_overrides
#239
dweindl
closed
6 months ago
1
Release 0.2.6
#238
dweindl
closed
6 months ago
1
Update CODEOWNERS
#237
dweindl
closed
6 months ago
1
Doc: Clean up visualization examples
#236
dweindl
closed
6 months ago
1
Fix `flatten_timepoint_specific_output_overrides` not supporting obse…
#235
dweindl
closed
6 months ago
1
`flatten_timepoint_specific_output_overrides` does not support observableParameter overrides as placeholders in noise formulae
#234
dweindl
closed
6 months ago
0
Release v0.2.5
#233
dilpath
closed
6 months ago
1
Vis: fix replicates sorting
#232
plakrisenko
closed
6 months ago
1
Treat observableParameter overrides as placeholders in noise formulae
#231
dilpath
closed
6 months ago
2
Startpoint sampling for a subset of parameters
#230
dweindl
closed
8 months ago
1
Validator: check `datasetId` in visualizations table exists in measurements table
#229
dilpath
closed
1 week ago
0
Fix accessing preequilibrationConditionId without checking for presence
#228
dweindl
closed
8 months ago
2
Release 0.2.4
#227
dweindl
closed
9 months ago
1
Fix pandas 2.1.0 FutureWarnings
#226
dweindl
closed
10 months ago
0
Add pre-commit-config, run black, isort, ...
#225
dweindl
closed
10 months ago
1
pandas FutureWarning: Setting an item of incompatible dtype is deprecated
#224
dweindl
closed
9 months ago
0
Handle missing nominalValue in Problem.get_x_nominal
#223
dweindl
closed
11 months ago
1
Customizable figure size
#222
dweindl
closed
11 months ago
1
Handle DataFrame/None as input to `get_visualization_df`
#221
dweindl
closed
11 months ago
1
API for creating petab problems from scratch
#220
dweindl
opened
11 months ago
0
Validator does not check for required column `noiseFormula` in observables table
#219
dweindl
opened
11 months ago
0
Improve error handling in Problem.from_yaml - parameter_file
#218
dweindl
opened
11 months ago
0
Improve error handling in Problem.from_yaml - format_version
#217
dweindl
opened
11 months ago
0
Release 0.2.3
#216
dweindl
closed
11 months ago
1
Make validate_visualization_df work without matplotlib installation
#215
dweindl
closed
11 months ago
1
Fix missing inplace=True in validation of visualization tables
#214
dweindl
closed
11 months ago
1
Handle default for `plotTypeData` in validation of visualization tables
#213
dweindl
closed
11 months ago
0
PEtab validation should not require matplotlib
#212
dweindl
closed
11 months ago
0
Release 0.2.2
#211
dweindl
closed
1 year ago
1
Filter/expect/prevent warnings in test suite
#210
dweindl
closed
1 year ago
1
Fix IndexError during test_visualization_with__t_inf
#209
dweindl
closed
1 year ago
0
GHA/pypi: trusted publishing
#208
dweindl
closed
1 year ago
0
Make `SbmlModel.from_file(..., model_id)` optional
#207
dilpath
closed
1 year ago
0
test_visualization_with__t_inf fails
#206
dweindl
closed
1 year ago
0
Release 0.2.1
#205
dweindl
closed
1 year ago
1
Fix Problem.to_files(model_file=...)
#204
dweindl
closed
1 year ago
1
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