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PEtab-dev
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libpetab-python
Python package for working with PEtab files
https://libpetab-python.readthedocs.io
MIT License
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recommonmark is deprecated since may
#66
plakrisenko
closed
2 years ago
3
Release 0.1.19
#65
dweindl
closed
3 years ago
1
petablint: require overriding of observable/noise placeholder parameters
#64
dweindl
closed
3 years ago
1
Petablint doesn't check for noise in measurement table
#63
lorenapohl
closed
3 years ago
1
Smooth simulation
#62
plakrisenko
closed
3 years ago
1
lint doesnt check for `;` at the end of observable parameter definitions
#61
FFroehlich
closed
3 years ago
0
Fix unreachable TypeError in petab.parameter_mapping.apply_overrides_…
#60
dweindl
closed
3 years ago
5
Unreachable TypeError in `petab.parameter_mapping.apply_overrides_for_observable`
#59
FFroehlich
closed
3 years ago
2
Visualization refactoring
#58
plakrisenko
closed
3 years ago
2
Optional relative paths in generated YAML
#57
dilpath
closed
3 years ago
2
fix override check for empty measurement table
#56
FFroehlich
closed
3 years ago
3
Release 0.1.18
#55
dweindl
closed
3 years ago
1
Doc: misc
#54
dweindl
closed
3 years ago
0
Doc: misc
#53
dweindl
closed
3 years ago
1
Doc: Cleanup RTD config
#52
dweindl
closed
3 years ago
1
Parameter mapping: Add option to ignore time-point specific noiseParameters
#51
dweindl
closed
3 years ago
0
Release 0.1.17
#50
dweindl
closed
3 years ago
0
fix noise formula check
#49
FFroehlich
closed
3 years ago
1
Fix override check and add noise formula check
#48
FFroehlich
closed
3 years ago
1
Fix timepoint override check
#47
FFroehlich
closed
3 years ago
0
Release 0.1.16
#46
dweindl
closed
3 years ago
0
Release 0.1.15
#45
dweindl
closed
3 years ago
1
fix timepoint specific mapping check
#44
FFroehlich
closed
3 years ago
0
Fix get_required_parameters_for_parameter_table
#43
dweindl
closed
3 years ago
1
improve flatten overrides
#42
FFroehlich
closed
3 years ago
1
Remove non-package-related files, update links
#41
dweindl
closed
3 years ago
1
Remove non-package-related files, update links
#40
dweindl
closed
3 years ago
0
Cleanup repository after splitting off PEtab library
#39
dweindl
closed
3 years ago
0
visu-error if dataset_id not given, but yValues, yValues need to be sorted alphabetically
#38
erikadudki
closed
3 years ago
1
wrong legends when visu_specification file without datasetId & yValues
#37
erikadudki
closed
3 years ago
0
plotting petab problem with simulations by observables does not work
#36
MerktSimon
closed
3 years ago
7
Python API for linter
#35
yannikschaelte
opened
3 years ago
2
Logic of petab.visualize.helper_functions.get_vis_spec_dependent_columns_dict
#34
FFroehlich
closed
3 years ago
8
Visualization: plotTypeData ' replicate ' not working
#33
erikadudki
closed
3 years ago
3
Missing validity check for simulationConditionId.
#32
FFroehlich
closed
2 years ago
3
Errorbars not directly plotted
#31
stobiblum
closed
3 years ago
1
Simulation is not plotted correctly using visualization specification
#30
stobiblum
closed
3 years ago
1
datasetId not optional for visualization table
#28
PaulJonasJost
closed
3 years ago
1
observables but not species supported in `noiseFormula`
#29
paulflang
closed
2 years ago
4
single objectivePriorParameters are cast to numpy.float64
#27
FFroehlich
opened
4 years ago
7
writer functions do not perform sanity checks + use misleading options for writing tsv
#26
FFroehlich
opened
4 years ago
11
Should unspecified optional strings be the empty string or NaN?
#25
dilpath
opened
4 years ago
4
noise in visualization dataframe gets overwritten by meanAndSD
#24
MerktSimon
closed
3 years ago
1
barplot labeling issues
#23
MerktSimon
closed
3 years ago
1
Visualization of measurements without condition table and visualization table
#22
dweindl
opened
4 years ago
0
Visualization: if column 'XValues' not provided and multiple conditions should be plotted automatically
#21
erikadudki
opened
4 years ago
2
virtual datasetId for sim df only works if ordered as mes df
#20
MerktSimon
closed
3 years ago
2
visulization function import_from_file has no use
#19
MerktSimon
closed
3 years ago
2
consistent coloring of legend entries across plots
#18
FFroehlich
opened
4 years ago
1
xOffset for logscale xValues
#17
FFroehlich
opened
4 years ago
1
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