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Phenomics
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ontolib
A modern Java library for working with (biological) ontologies.
https://ontolib.readthedocs.org
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Bugfix/go annotation parser
#42
pnrobinson
closed
6 years ago
0
update develop
#41
pnrobinson
closed
6 years ago
0
get MICA
#40
pnrobinson
closed
6 years ago
4
Utility class
#39
pnrobinson
opened
6 years ago
1
HpoFrequency should return a proportion rather than a percentage
#38
pnrobinson
opened
6 years ago
2
Mpo parser
#37
pnrobinson
closed
11 months ago
1
adding function existsPath together with test
#36
pnrobinson
closed
6 years ago
1
existsPath
#35
pnrobinson
opened
6 years ago
4
Are terms in Termmap unique?
#34
pnrobinson
opened
6 years ago
2
Mpo parser
#33
pnrobinson
closed
6 years ago
1
Bug in MpoOboFactory
#32
pnrobinson
opened
6 years ago
1
Subontology
#31
pnrobinson
opened
6 years ago
1
Inheritance and Freqeuncy in HpoDisease
#30
pnrobinson
opened
6 years ago
3
add version information so users can simply copy-paste.
#29
drseb
opened
6 years ago
3
? Bug in getPhenotypicAbnormalitySubOntology();
#28
pnrobinson
opened
7 years ago
4
Maven Central version badge
#27
julesjacobsen
closed
7 years ago
1
Fix documentation to reflect what code is actually doing
#26
johntiger1
opened
7 years ago
1
TermID vs TermId
#25
johntiger1
closed
6 years ago
3
HpoID vs TermID
#24
johntiger1
closed
6 years ago
4
Adding support for xref tag.
#23
holtgrewe
closed
7 years ago
0
HpoDisease design
#22
pnrobinson
opened
7 years ago
5
Removing crufty similarity measures.
#21
holtgrewe
closed
7 years ago
0
Adding `Ontology.getParents()`.
#20
holtgrewe
closed
7 years ago
0
Improved score distribution I/O
#19
holtgrewe
closed
7 years ago
2
get parents
#18
pnrobinson
opened
7 years ago
5
Xrefs
#17
pnrobinson
closed
7 years ago
3
SLF4J messages
#16
pnrobinson
closed
7 years ago
3
Score distribution files have to be sub-sampled
#15
holtgrewe
closed
7 years ago
1
Adding CLI to score precomputation
#14
holtgrewe
closed
7 years ago
2
Parse error for hp.obo caused by Date format
#13
pnrobinson
closed
7 years ago
3
[Please read details] Change date so we can use phenotype_annotation.tab
#12
johntiger1
closed
7 years ago
3
Fix code so it can be directly copied into java
#11
johntiger1
closed
7 years ago
2
Version should be 0.1, or found/generated from https://github.com/Phenomics/ontolib
#10
johntiger1
closed
7 years ago
5
Remove rarely used sim-measures
#9
drseb
closed
7 years ago
0
Add ability to update score distributions
#8
julesjacobsen
closed
7 years ago
3
Add parser/transformer for obographs json
#7
cmungall
opened
7 years ago
3
Code refinement
#6
visze
closed
7 years ago
3
compilation error
#5
visze
closed
7 years ago
0
Add "manual" type documentation
#4
holtgrewe
opened
7 years ago
1
Setup Travis CI
#3
holtgrewe
closed
7 years ago
1
Make tests more comprehensive
#2
holtgrewe
opened
7 years ago
1
Make API documentation complete
#1
holtgrewe
closed
7 years ago
1