RGLab openCyto issues - Githubissues

RGLab / openCyto

A package that provides data analysis pipeline for flow cytometry.

GNU Affero General Public License v3.0

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issues

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tmix2DGate not found

#217 santoshe1 closed 4 years ago
1
tail_gate function side argument alters the start, but not end, position of the gate

#216 Tariq-K closed 4 years ago
15
flowDensity wrapper error

#215 alexheubeck closed 4 years ago
5
Function or documentation to create derived parameter

#214 steveb-123 closed 4 years ago
30
Can we use Opencyto to gate cytotoxic T cell subsets using 3 markers?

#213 Sithara85 closed 4 years ago
11
Use the C++ library outside R?

#212 Mosaic-DigammaDB closed 4 years ago
3
MFI values from gates

#211 browshanravan closed 4 years ago
17
gating on multiple populations with flowClust.2d

#210 browshanravan closed 4 years ago
6
Potential errors in "An Introduction to the openCyto package" vignette

#209 stefankolling closed 4 years ago
5
Selecting specific cell populations

#208 IvanaOsredek closed 4 years ago
3
pivot option to gate_mindensity and gate_mindensity2 is not honored

#207 jacobpwagner closed 3 years ago
4
boolGates not appearing as nodes in plot(gs) gating tree

#206 alexheubeck closed 4 years ago
2
How to extract the cell label information

#205 liupeng2117 closed 4 years ago
2
gating vs gt_gating

#204 bjreisman closed 5 years ago
7
Empty plots from plotGate

#203 jmcelh closed 4 years ago
1
Export .preprocess_csv

#202 DillonHammill closed 5 years ago
11
quadGate.tmix and quadGate.seq not working

#201 jonasmac16 closed 4 years ago
2
Export as.data.table.gatingTemplate

#200 DillonHammill closed 5 years ago
3
Passing quadrantGate objects through openCyto gatingTemplate

#199 DillonHammill closed 5 years ago
19
"empty" channels after cleaning up channel names

#198 joe-jhou2 closed 5 years ago
3
Error in add_pop function

#197 abbatidanilo closed 5 years ago
3
inherited method for function 'dims'

#196 fbenedett closed 5 years ago
7
flowClust.2d in csv

#195 fbenedett closed 5 years ago
1
Simple gate on debris and doublets

#194 fbenedett closed 5 years ago
9
unexplained warning messages with flowWorkspaceData samples

#193 rwbaer closed 5 years ago
3
Dummy gate T/F Issue

#192 nmonhait closed 4 years ago
8
Improving documentation for `tailgate()`

#191 ptvan closed 4 years ago
5
add_pop() not adding gates to "root" node

#190 DillonHammill closed 5 years ago
9
Accessing estimated parameters of estimateLogicle

#189 coh-racng closed 5 years ago
6
write coerce method (to flowFrame) for cytoset

#188 mikejiang closed 4 years ago
1
Numeric groupBy not returning correct samples

#187 DillonHammill closed 6 years ago
6
FSC and SSC scale changed after export fcs file

#186 joe-jhou2 closed 6 years ago
20
Quadrant gates are not showing up

#185 jfreimer closed 4 years ago
3
Add taut string gating code

#184 gfinak closed 6 years ago
1
gating(gt, gs) - Applies gt to gs and other GatingSets

#183 DillonHammill closed 6 years ago
2
quadGate.seq gates not displaying correctly using ggcyto

#182 malisas closed 4 years ago
1
Error message when ploting .boundary gates

#181 schevrie closed 6 years ago
3
Returning gateobj saved to gatingTemplate gating_args

#180 DillonHammill closed 6 years ago
5
Extracting entire gatingTemplate from GatingSet

#179 DillonHammill closed 6 years ago
9
no manual.xml in extdata

#178 abbatidanilo closed 6 years ago
2
Handling empty sets when gating with templates

#177 feltzmc closed 6 years ago
4
New BiocGenerics dims import error with add_pop

#176 DillonHammill closed 6 years ago
2
Access GatingTemplate Entries within Plugin Function

#175 DillonHammill closed 6 years ago
5
Preprocessing Function to Restrict FlowSet by pData

#174 DillonHammill closed 6 years ago
6
Working with Character String gating_args in GatingTemplate

#173 DillonHammill closed 6 years ago
2
Create DrawGate - Manual Gating

#172 DillonHammill closed 4 years ago
0
openCyto Plugin Supporting Manual Drawing of polygonGates

#171 DillonHammill closed 4 years ago
26
Extract Multiple Populations From GatingSet with getData API

#170 DillonHammill closed 6 years ago
4
how to obtain all data except a boundary gate?

#169 MartyMestdagh closed 6 years ago
15
Feature Request: Allowing Multiple Parent Populations in GatingTemplate Entry

#168 DillonHammill closed 6 years ago
5

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