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RGLab
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openCyto
A package that provides data analysis pipeline for flow cytometry.
GNU Affero General Public License v3.0
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Parallelogram autogating
#154
kdh4win4
closed
3 years ago
0
Errors in compensate() function
#153
aarzalluz
closed
6 years ago
3
Using flowJo workspace to gate FCS files
#152
jmckib
closed
6 years ago
3
Use "gating.template()" on data.table
#151
kratschie
closed
7 years ago
1
quadGate.tmix is not working well.
#150
kdh4win4
closed
6 years ago
1
How to get gated-area
#149
kdh4win4
closed
7 years ago
4
Transform option
#148
kdh4win4
closed
7 years ago
2
How to merge two groups which have slightly different order of marker names
#147
kdh4win4
closed
6 years ago
9
Using more CPU and Memory
#146
kdh4win4
closed
7 years ago
3
plotGate issue ?
#145
kdh4win4
closed
7 years ago
5
Changing sampleNames after gating and transformation
#144
kdh4win4
closed
7 years ago
4
How to change sample name
#143
kdh4win4
closed
7 years ago
2
read.ncdfFlowSet("fs from several different directories")
#142
kdh4win4
closed
7 years ago
9
How to get the outside of flowClust-circled area
#141
kdh4win4
closed
7 years ago
2
How to get autogating result as excel file
#140
kdh4win4
closed
7 years ago
2
mindensity2 with two "gate_range=c()"
#139
kdh4win4
closed
7 years ago
1
Unique alias name
#138
kdh4win4
closed
7 years ago
2
Unusual gating
#137
kdh4win4
closed
7 years ago
0
mindensity issue
#136
kdh4win4
closed
7 years ago
13
Error in getChannelMarker(frm, channel) : can't find "marker_name"
#135
msuffiot
closed
6 years ago
2
Log-scale plot with "plotGate()" function ?
#134
kdh4win4
closed
7 years ago
25
Gating error message.
#133
kdh4win4
closed
7 years ago
21
gating() function with Shiny interface
#132
qbarbier
closed
7 years ago
17
Various fixes
#131
gfinak
closed
7 years ago
0
parsing gating template CSV causes warning with data.table 1.10.4
#130
ptvan
closed
7 years ago
1
gate_flowClust_1d returns error
#129
evangreene
closed
7 years ago
2
Suggestion for gating template file format
#128
zhanxw
closed
6 years ago
1
Error: missing value where TRUE/FALSE needed flowDensity
#127
anaraserikbek
closed
8 years ago
1
Using quantileGate in template throws error: "A single channel must be specified."
#126
ccasar
closed
8 years ago
2
registering the quadrantGate function of flowStats package
#125
anaraserikbek
closed
6 years ago
1
When using flowClust.2d for a transitional gate
#124
anaraserikbek
closed
6 years ago
1
allow the program keep gating a GatingSet when Error occurs
#123
anaraserikbek
closed
8 years ago
5
Plotting an overlay of multiple density plots from gatingset
#122
john-lee-johnson
closed
8 years ago
3
flowIncubator function tmix2DGate and flowClustFast error
#121
anaraserikbek
closed
6 years ago
10
plugin function 'filter' from flowClust package for usage in .csv gating template
#120
anaraserikbek
closed
8 years ago
1
application of mclust for clustering .FCS data
#119
anaraserikbek
closed
3 years ago
1
flowClust gating method for identifying several clusters
#118
anaraserikbek
closed
6 years ago
10
openCyto paper's gating template trial
#117
anaraserikbek
closed
6 years ago
1
quadGate.tmix gating method
#116
anaraserikbek
closed
6 years ago
2
speed up flowClust.2d
#115
mikejiang
closed
6 years ago
7
registerPlugin
#114
anaraserikbek
closed
6 years ago
12
algorithm incorporated in openCyto that would identify several clusters in 2D data
#113
anaraserikbek
closed
8 years ago
7
possibility of importing polygon gates
#112
anaraserikbek
closed
6 years ago
2
Using nonDebris+ & DebrisGate+
#111
anaraserikbek
closed
6 years ago
3
openCyto gating algorithms questions
#110
anaraserikbek
closed
6 years ago
2
importing the gating workspace from flowJo as .xml file in order to work in flowSOM
#109
anaraserikbek
closed
6 years ago
1
Using one flowJo workspace to gate many .FCS files
#108
anaraserikbek
closed
3 years ago
4
write a separate vignette to demonstrate the usages of the different gating methods
#107
mikejiang
closed
8 years ago
2
OpenCyto Analysis of HVTN080 Broken
#106
tobiguennel
closed
3 years ago
0
Example of flowClust
#105
SamGG
closed
6 years ago
6
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