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AlphaLink2
AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
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ftp.wwpdb.org deprecated
#35
FriedLabJHU
opened
14 hours ago
0
homodimeric protein complexes
#34
jimfeng9705
opened
1 week ago
21
Question: format of distance restraints
#33
BelyaevaJuly
opened
1 week ago
1
Using MMseqs2
#32
adahal258
opened
3 months ago
1
Index error
#31
jimfeng9705
opened
3 months ago
4
Getting log.txt file
#30
adahal258
opened
3 months ago
1
distance_distribution, pae, plddt not in output directory
#29
adahal258
closed
3 months ago
4
Changing parameters in Alphalink2
#28
soumyaremesh
opened
4 months ago
4
MSA Subsampling Feature
#27
camillapaleari
opened
4 months ago
6
During prediction step, PytorchStreamReader failed reading zip archive: failed finding central directory
#26
decortja
closed
4 months ago
1
chains.txt not found?
#25
decortja
closed
5 months ago
2
Inter-subunit crosslinks
#24
jimfeng9705
closed
3 months ago
6
Installation on HPC with preinstalled AlphaFold
#23
AntKuzmenko
opened
5 months ago
1
Meaning of "crosslink satisfaction"?
#22
joshwa-s
opened
8 months ago
3
Incorporation of monolinks
#21
enriquead1
opened
9 months ago
2
Can pLDDT coloring be applied to models in ChimeraX?
#20
joshwa-s
closed
9 months ago
2
Applicability of AlphaLink2 to different cross-linkers
#19
loggy01
closed
9 months ago
0
Update
#18
lhatsk
closed
10 months ago
0
Colab Notebook fails at generate MSA step - T4 GPU runtime
#17
RCowan1983
opened
10 months ago
1
Question about model confidence parameters when generating more than 1 model
#16
andreadiianni
closed
11 months ago
2
More details about training process
#15
Li-dacheng
opened
12 months ago
3
distance for crosslinks
#14
Samuel-gwb
closed
11 months ago
6
Questions about notebook and performances
#13
alessiodiianni
closed
11 months ago
4
EOFError: Ran out of Input (Colaboratory)
#12
ciancone94
closed
1 year ago
0
Feature.pkl.gz file not found
#11
maxochondria
opened
1 year ago
13
Streamlining installation using a conda environment file
#10
multimeric
opened
1 year ago
5
No crosslinks satisfied
#9
roivant-matts
opened
1 year ago
14
Homo-oligomer prediction?
#8
heejongkim
opened
1 year ago
6
ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
#7
liusfore
opened
1 year ago
4
Notebook AlphaLink2 producing corrupted output
#6
ggerlach1
opened
1 year ago
6
ERROR: unicore-0.0.1+cu118torch2.0.0-cp310-cp310-linux_x86_64.whl is not a supported wheel on this platform
#5
LuluKroeb
opened
1 year ago
1
Features pkl has a different name
#4
sami-chaaban
closed
1 year ago
9
Cross link input
#3
roivant-matts
opened
1 year ago
7
Clarification of inputs and outputs.
#2
mcale6
opened
1 year ago
13
model weights in gz format.
#1
MingchenChen93
closed
1 year ago
0