Rappsilber-Laboratory AlphaLink2 issues

Rappsilber-Laboratory / AlphaLink2

AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer

Creative Commons Attribution 4.0 International

42 stars 11 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

During prediction step, PytorchStreamReader failed reading zip archive: failed finding central directory

#26 decortja opened 1 week ago
1
chains.txt not found?

#25 decortja closed 1 week ago
2
Inter-subunit crosslinks

#24 jimfeng9705 opened 3 weeks ago
6
Installation on HPC with preinstalled AlphaFold

#23 AntKuzmenko opened 3 weeks ago
1
Meaning of "crosslink satisfaction"?

#22 joshwa-s opened 3 months ago
3
Incorporation of monolinks

#21 enriquead1 opened 4 months ago
2
Can pLDDT coloring be applied to models in ChimeraX?

#20 joshwa-s closed 4 months ago
2
Applicability of AlphaLink2 to different cross-linkers

#19 loggy01 closed 4 months ago
0
Update

#18 lhatsk closed 5 months ago
0
Colab Notebook fails at generate MSA step - T4 GPU runtime

#17 RCowan1983 opened 6 months ago
1
Question about model confidence parameters when generating more than 1 model

#16 andreadiianni closed 6 months ago
2
More details about training process

#15 Li-dacheng opened 7 months ago
1
distance for crosslinks

#14 Samuel-gwb closed 6 months ago
6
Questions about notebook and performances

#13 alessiodiianni closed 6 months ago
4
EOFError: Ran out of Input (Colaboratory)

#12 ciancone94 closed 8 months ago
0
Feature.pkl.gz file not found

#11 maxochondria opened 9 months ago
13
Streamlining installation using a conda environment file

#10 multimeric opened 11 months ago
5
No crosslinks satisfied

#9 roivant-matts opened 11 months ago
14
Homo-oligomer prediction?

#8 heejongkim opened 11 months ago
6
ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.

#7 liusfore opened 11 months ago
4
Notebook AlphaLink2 producing corrupted output

#6 ggerlach1 opened 12 months ago
6
ERROR: unicore-0.0.1+cu118torch2.0.0-cp310-cp310-linux_x86_64.whl is not a supported wheel on this platform

#5 LuluKroeb opened 12 months ago
1
Features pkl has a different name

#4 sami-chaaban closed 1 year ago
9
Cross link input

#3 roivant-matts opened 1 year ago
7
Clarification of inputs and outputs.

#2 mcale6 opened 1 year ago
13
model weights in gz format.

#1 MingchenChen93 closed 1 year ago
0