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SAND-Lab
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MEA-NAP
MEA-NAP. A streamlined diagnostic and analytic tool for data obtained using microelectrode arrays.
GNU General Public License v3.0
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Error before 4B
#56
kamaood
opened
3 weeks ago
6
Error before 2B
#55
kamaood
closed
3 weeks ago
6
Filter parameters and spike dection
#54
wxc1234567891111111
closed
2 months ago
3
Not enough nodes
#53
adampavlinek
opened
3 months ago
1
Error before step 2B
#52
adampavlinek
closed
3 months ago
2
Sample file running error
#51
wxc1234567891111111
opened
3 months ago
5
File conversion issue
#50
adampavlinek
closed
3 months ago
8
High Pass Filter Not Working for Axion Maestro MEA Data
#49
davidioluigbo
closed
5 months ago
1
Merge pull request #47 from SAND-Lab/dev
#48
Timothysit
closed
5 months ago
0
Merge pull request #46 from SAND-Lab/main
#47
Timothysit
closed
5 months ago
0
Fixes mostly related to advanced settings
#46
Timothysit
closed
5 months ago
0
Fixes moving advanced settings options to GUI mode
#45
Timothysit
closed
5 months ago
0
added option specification previously in advanced settings
#44
Timothysit
closed
5 months ago
0
add csv extension if not found in filename
#43
Timothysit
closed
6 months ago
0
Analysis pipeline gets stuck at step 2A
#42
adampavlinek
closed
5 months ago
17
Error in raw data folder input
#40
adampavlinek
closed
6 months ago
2
Update guide-for-new-users.rst
#39
SAND-Group
closed
7 months ago
0
Update guide-for-advanced-users.rst
#38
SAND-Group
closed
8 months ago
0
Update .gitignore
#37
Timothysit
closed
8 months ago
0
Licence file needed
#36
sje30
closed
8 months ago
1
updated spike alignment + faster
#35
jeremi-chabros
opened
1 year ago
0
Normalisation value PL, CC, etc.
#34
hhs2
opened
1 year ago
0
Colormap settings biAdvancedSettings
#33
hhs2
closed
9 months ago
2
Rename Params.excludeEdgesBelowThreshold
#32
hhs2
closed
7 months ago
2
Global threshold applied in ExtractNetMet
#31
hhs2
opened
1 year ago
1
Update methods.rst
#30
hhs2
closed
1 year ago
0
Update methods.rst
#29
hhs2
closed
1 year ago
0
Update methods.rst
#28
hhs2
closed
1 year ago
0
Spike detection error about: Nonfinite endpoints or increment for colon operator in index.
#27
Timothysit
closed
1 year ago
1
Added Params.figExt to pipeline steps
#26
davidioluigbo
closed
1 year ago
0
Updated Github Documentation
#25
davidioluigbo
closed
1 year ago
0
Update batchDetectSpikes.m
#24
yuanyin98
closed
1 year ago
0
Update MEApipeline.m
#23
yuanyin98
closed
1 year ago
0
(Step 1B) Blank SpikeFrequencies .png and .svg Files
#22
davidioluigbo
closed
2 years ago
1
Added images to documentation
#21
davidioluigbo
closed
2 years ago
0
Pipeline error at step 4B
#20
XuelinWangTvT
closed
2 years ago
7
Error in Step1 Spike Detection: unable to remove grounded electrodes
#19
yuanyin98
closed
1 year ago
3
Error in Step 4A of Analysis Pipeline due to Invalid or Deleted Figure
#18
davidioluigbo
closed
2 years ago
2
save figures in plotSpikeDetectionChecks
#17
yuanyin98
closed
1 year ago
2
Some network plots (step 4 of the pipeline) are not made
#16
Timothysit
closed
2 years ago
1
Remove hard-coded sampling rate in `burstDetect.m`
#15
Timothysit
closed
2 years ago
1
st-bin_ms*25 in ` plotSpikeDetectionChecks.m`
#14
Timothysit
opened
2 years ago
0
The variable 'st' is not recognized or defined in plotSpikeDetectionChecks (line 157)
#13
davidioluigbo
closed
2 years ago
1
Catching unsupported wavelet names in spike detection step
#12
Timothysit
closed
2 years ago
1
Adding stationary wavelet transform (SWT) spike detection to the pipeline
#11
Timothysit
closed
9 months ago
1
Clarifying what `Params.SpikesMethod` does
#10
Timothysit
closed
2 years ago
1
Sampling frequency of acquisition are sometimes hard-coded
#9
Timothysit
closed
2 years ago
1
[Feature request] For network plots plotting node colours by network metrics, scale the colorbar according to maximum and minimum values across batch of recording
#8
EliseChang
closed
1 year ago
1
Colorbar axis incorrectly labelled in output: 4_NetworkActivity\4A_IndividualNetworkAnalysis\"Group Name"\"Lag"\3-5_MEA_NetworkPlotNode degreeBetweeness centrality/Participation coefficient/Node strengthlocal connectivity
#7
EliseChang
closed
2 years ago
2
[Feature request] Add pre-post TTX spike detection comparison to network pipeline
#6
Timothysit
opened
2 years ago
0
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