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Sage-Bionetworks
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cleanAD
Tools for cleaning and organizing study data for the AD Knowledge Portal.
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Study has an acknowledgement statement (wikis here)
#29
avanlinden
opened
1 year ago
0
Fix error when encountering more than one biospecimen file per study
#28
avanlinden
closed
2 years ago
0
Use master branch instead of main
#27
thomasyu888
closed
2 years ago
0
Use COPY in Dockerfile instead of ADD
#26
thomasyu888
opened
2 years ago
0
[IBCDPE-262] github action docker build
#25
thomasyu888
closed
2 years ago
0
Scheduled job setup
#24
avanlinden
closed
2 years ago
0
locate config.yml file for script execution in container
#23
avanlinden
closed
2 years ago
0
fix path to table script
#22
avanlinden
closed
2 years ago
0
Revert "export upload_log_file namespace"
#21
avanlinden
closed
2 years ago
0
export upload_log_file namespace
#20
avanlinden
closed
2 years ago
0
Remove JSON from specimen table
#19
avanlinden
closed
2 years ago
0
MayoRNAseq biospecimen file does not have unique specimenIDs for all specimens
#18
avanlinden
opened
2 years ago
0
"retire" rnaSeqReprocessing study v1 and replace with GRCh38 version
#17
avanlinden
opened
2 years ago
0
MSBB ApoE Status Missing
#16
jgockley62
opened
2 years ago
0
MSBB biospecimen file missing tissue for 66 RNAseq specimens
#15
avanlinden
closed
2 years ago
1
Banner proteomics metadata discrepancies
#14
avanlinden
opened
2 years ago
5
Archive WGS Data Transfer bam files
#13
avanlinden
opened
3 years ago
4
Update readme to point to sagebionetworks/cleanad docker image
#12
Aryllen
closed
3 years ago
0
Fix problem in Dockerfile with debian release changes
#11
Aryllen
closed
3 years ago
0
ROSMAP biospecimen file - fix nucleicAcidSource
#10
avanlinden
closed
2 years ago
1
Add docker and minor updates; update readme
#9
Aryllen
closed
3 years ago
0
ROSMAP metabolomics metadata creation
#8
avanlinden
closed
2 years ago
2
cleanAD package + specimen table script and functions
#7
Aryllen
closed
3 years ago
3
ADNI1/2/GO
#6
avanlinden
opened
3 years ago
0
MCADGS
#5
Aryllen
opened
3 years ago
2
ROSMAP
#4
Aryllen
opened
4 years ago
27
MayoRNAseq
#3
Aryllen
closed
3 years ago
19
MSBB
#2
Aryllen
closed
3 years ago
40
Consider report generation
#1
Aryllen
opened
4 years ago
0