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VUmcCGP
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wisecondor
WISECONDOR (WIthin-SamplE COpy Number aberration DetectOR): Detect fetal trisomies and smaller CNV's in a maternal plasma sample using whole-genome data.
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Fix manifest to include Rscripts
#55
matthdsm
closed
7 months ago
0
Question about inputs
#54
NstVasileva
closed
2 years ago
2
Regarding wisecondor.py convert
#53
sneha1201
closed
2 years ago
2
Feature/upgrade cli
#52
matthdsm
closed
3 years ago
0
Wisecondor DEFRAG algorithm
#51
smruti241
opened
3 years ago
23
Wisecondor run.sh script
#50
smruti241
closed
3 years ago
5
sam/cram input support
#49
matthdsm
closed
3 years ago
0
Sex Chromosomes Aneuploidy Detection
#48
ghost
opened
4 years ago
4
What does a high negative z-score indicates?
#47
GreeshmaThulasi
opened
5 years ago
8
can you post some real positive and negtive result with pdf and settings e.g. binsize, sample size
#46
zsanli
opened
5 years ago
0
HMTL Viewer for the latest ver of WISECONDOR
#45
chantisakee
opened
5 years ago
0
Gonosome masking
#44
leraman
closed
5 years ago
0
Param
#43
leraman
closed
5 years ago
0
Imports
#42
leraman
closed
6 years ago
0
Gender argument
#41
leraman
closed
6 years ago
0
Error while running wisecondor
#40
Kritikaraya
opened
6 years ago
7
V0.2.0 of full blown 1.0?
#39
leraman
closed
6 years ago
0
Conda.readme
#38
leraman
closed
6 years ago
0
Bugfix/manifest
#37
matthdsm
closed
6 years ago
0
Finding microdeletions
#36
GreeshmaThulasi
opened
6 years ago
8
On new version wisecondor z-score threshold problems
#35
chaizuolin
closed
6 years ago
4
create referece
#34
chaizuolin
closed
6 years ago
7
Pickle to NPZ?
#33
biocyberman
closed
7 years ago
2
Wrong bin selection in reference creation
#32
rstraver
closed
7 years ago
1
Cytobands do not scale in plots
#31
rstraver
closed
7 years ago
0
A question regarding the usage of wisecondor
#30
JIAYUREN000
closed
7 years ago
1
A question about the TriArr class
#29
Karma0alpha
closed
7 years ago
1
question of procedure
#28
fengdong110
closed
7 years ago
3
creation reference
#27
fengdong110
closed
7 years ago
5
Feature/exclude chromosomes in test
#26
Bratdaking
closed
7 years ago
3
Extract chromosome coverage from .pickle files?
#25
biocyberman
closed
8 years ago
3
Ion-wisecondor
#24
dridk
closed
8 years ago
2
how to prepare reads for NIPT ?
#23
WinterLi1993
closed
7 years ago
17
Question: Chromosome-wide zscore to use?
#22
biocyberman
closed
8 years ago
2
Add a Gitter chat badge to README.md
#21
gitter-badger
closed
7 years ago
0
gcc.py Downsampling and interpolation
#20
rstraver
closed
7 years ago
0
gcc.py X and Y chromosomes
#19
rstraver
closed
7 years ago
0
index error while running test.py
#18
shawpa
closed
9 years ago
7
Problem with gcc file
#17
markb41
closed
9 years ago
3
WISECONDOR-OUTPUT issues
#16
Manonanthini
closed
9 years ago
4
Unexpected binning in countgc.py
#15
siongkong
closed
9 years ago
1
Missing Penultimate Bin in countgc.py
#14
siongkong
closed
9 years ago
3
please add example
#13
dridk
closed
9 years ago
2
we are targeting chromosome 21 for sequencing.Is wisecondor work for targated sequengin? what coverage we require then?
#12
gauravkadu
closed
10 years ago
3
Windowed aneuploidy test output question
#11
shawpa
closed
10 years ago
1
error creating reference table
#10
shawpa
closed
10 years ago
2
Version
#9
dvanbeek
closed
7 years ago
0
What happened to the RETRO filter?
#8
wyleung
closed
10 years ago
1
Exporting GC normalized to text ouput
#7
guillermomarco
closed
10 years ago
6
Object oriented version, export more "internal" computed values to export pickle
#6
wyleung
closed
7 years ago
2
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