Vivianstats scImpute issues

Vivianstats / scImpute

Accurate and robust imputation of scRNA-seq data

https://www.nature.com/articles/s41467-018-03405-7

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issues

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Error in if (max(var_cum) <= var_thre) { : missing value where TRUE/FALSE needed

#39 Joyjoyjoyc opened 2 months ago
0
Error in parslist[valid_genes, , drop = FALSE] : subscript out of bounds

#38 josruirod opened 1 year ago
0
Error in pca$x[, 1:npc] : subscript out of bounds

#37 1213812138zqc opened 3 years ago
1
resume scImpute?

#36 dpschreiner opened 3 years ago
3
'mc.cores' > 1 is not supported on Windows

#35 Eismeer closed 3 years ago
0
Imputation error

#34 kin182 opened 3 years ago
4
About the 'genelen'

#33 zh-Bian opened 3 years ago
1
Running Scimpute for Allele specific analysis

#32 Hemantcnaik opened 4 years ago
0
Error in seq.default(lsmin, (Re(log2(midmin)) - 0.5), stepm) : 'from' must be a finite number

#31 Yale73 opened 4 years ago
2
Workflow of imputation, doublet detection and data integration

#30 xhbkirby opened 4 years ago
0
Processing time

#29 morganee261 opened 4 years ago
1
error of 'missing value where TRUE/FALSE needed'

#28 helianthuszhu opened 4 years ago
6
Question on a line of the codes.

#27 NuosiWu opened 4 years ago
0
Error in pca$x[, 1:npc] : subscript out of bounds

#26 xuyungang opened 5 years ago
0
Input and Output

#25 Winnie09 opened 5 years ago
1
doParallel performance on windows edition R

#24 ygidtu opened 5 years ago
2
Typo about genelen in help

#23 nbroguiere opened 5 years ago
0
Part of the data not imputed

#22 xianingz opened 5 years ago
3
outfile is space delimited rather than tab delimited

#21 wangz10 opened 5 years ago
1
Differential gene expression analysis following imputation

#20 eghorani closed 5 years ago
3
Processing time

#19 hr1912 closed 5 years ago
5
Parallel Processing cannot find library

#18 gouinK opened 5 years ago
1
Question about input file

#17 Gerde closed 5 years ago
1
Could not load the scImpute library in R after installation: Conflicts with other packages

#16 parichit closed 5 years ago
1
Parameter setting in tSNE using PBMC datasets

#15 Natsu01 closed 6 years ago
3
reproducing result for the PBMC plot

#14 radio1988 closed 6 years ago
1
Overestimation with new version

#13 carisdak closed 6 years ago
8
Parameter Selection

#12 radio1988 closed 6 years ago
2
No parallel version

#11 zji90 opened 6 years ago
1
PBMC Dataset used in paper to produce Figure 6

#10 fbrundu closed 6 years ago
7
No imputation with Kcluster = 1

#9 fbrundu closed 6 years ago
8
Error during cell similarity inference

#8 fbrundu closed 6 years ago
2
number of cells does not match number of labels

#7 djchin25 closed 6 years ago
1
Error in mclapply

#6 Cady123 closed 6 years ago
1
scimpute using only single thread

#5 baracus37 closed 6 years ago
1
Error in imputation

#4 mohuangx closed 6 years ago
4
Input/Output Options

#3 bvieth closed 6 years ago
1
Predict via lasso coefs in case of rank deficiency

#2 gokceneraslan closed 6 years ago
2
Delete README.Rmd

#1 Vivianstats closed 7 years ago
0