WGLab CancerVar issues - Githubissues

WGLab / CancerVar

Clinical interpretation of somatic mutations in cancer

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decode entries in Therap_list, Diag_list and Prog_list

#26 kythol opened 3 months ago
0
Error: can't read the LOF genes file cancervardb/LOF.genes.exac_me_cancers

#25 ajain195 opened 3 months ago
1
how to update cancervar.out.txt

#24 xiechangxiao closed 3 months ago
0
Error of opai_predictor.py using evidence-based model

#23 kakyungkim opened 10 months ago
2
override default databases with Annovar

#22 zoeward-nz opened 1 year ago
0
Overide default db Annovar

#21 zoeward-nz closed 1 year ago
0
cancervardb/ for hg38

#20 zoeward-nz opened 1 year ago
2
Invalid parameter in configuration file

#19 user-tq opened 1 year ago
0
choose the only one transcript for exonic variants

#18 user-tq opened 1 year ago
0
5 prediction tools are used instead of 7

#17 jud-b opened 2 years ago
0
Tail end error on CancerVar.py

#16 bgold04 opened 2 years ago
2
error using model ensemble

#15 evelingonzalezfeliu opened 2 years ago
0
Is it correct to assign EVS5=1 and EVS5=0 to all the variants if I know they are somatic?

#14 lincj1994 opened 3 years ago
0
Question about CBP10 in CancerVar web server.

#13 lincj1994 opened 3 years ago
1
Can I assign a score of 1 to all variants if I know they are somatic?

#12 lincj1994 closed 3 years ago
0
Issue about the VAF and Germline Variants (CBP5 and CBP6).

#11 lincj1994 closed 3 years ago
0
The input format for CNA data in command-line CancerVar

#10 lincj1994 opened 3 years ago
2
Difference between CancerVar and InterVar?

#9 lincj1994 closed 3 years ago
9
https://cancervar.wglab.org/databases/ cant be reached

#8 Bicyclecardcn opened 3 years ago
3
Database customization

#7 ashpsnair closed 3 years ago
0
difference between CancerVar and VIC?

#6 argoat opened 3 years ago
5
Remove unneeded spaces in the header

#5 ftucos opened 4 years ago
0
Missing files in cancervardb

#4 ftucos closed 4 years ago
3
Unrecognized character in orpha.txt

#3 ftucos closed 4 years ago
1
The PVS1.LOF.genes is incorrectly named

#2 ftucos closed 4 years ago
1
Where can I obtain hg38_icgc21.txt?

#1 CPTPaso opened 4 years ago
7