WhitakerLab scona issues

WhitakerLab / scona

Code to analyse structural covariance brain networks using python.

https://whitakerlab.github.io/scona/

MIT License

67 stars 33 forks source link

issues

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add version pins to fix deprecation issues

#157 akhanf opened 1 year ago
0
Update CONTRIBUTING.md

#156 kadambinipanda closed 3 years ago
2
Update CONTRIBUTING.md

#155 shruti1421 closed 3 years ago
2
Replace deprecated .node with .nodes, and fix regression testing

#154 Islast closed 4 years ago
0
Paired brains

#153 Islast opened 4 years ago
0
Two similar tutorials

#152 wingedRuslan opened 5 years ago
1
Add enhancements to the scona

#151 wingedRuslan opened 5 years ago
1
Make new get_anatomical_layouts() function

#150 wingedRuslan opened 5 years ago
1
View_corr_mat() - make new || leave old

#149 wingedRuslan opened 5 years ago
5
Removing old viz modules

#148 wingedRuslan opened 5 years ago
0
Test for visualisations

#147 wingedRuslan opened 5 years ago
1
Error with nilearn.plot_connectome

#146 wingedRuslan closed 5 years ago
1
Add Nilearn plotting functionality to scona

#145 wingedRuslan closed 5 years ago
4
View Connectome with nilearn

#144 wingedRuslan closed 5 years ago
5
Plots of brains in plotting anatomical network

#143 wingedRuslan opened 5 years ago
2
Nodal measures for plotting with nilearn

#142 wingedRuslan closed 5 years ago
5
small_world calculations

#141 wingedRuslan opened 5 years ago
1
Implementation of anatomical network visualisations

#140 wingedRuslan opened 5 years ago
1
Adjust legend of plot_rich_club

#139 KirstieJane opened 5 years ago
3
Catch error if name of graph doesn't exist in brain bundle for plot_rich_club

#138 KirstieJane closed 5 years ago
4
Pytestwarnings

#137 Islast closed 5 years ago
0
feature request: tell brainbundle the total number of brains you want

#136 Islast opened 5 years ago
0
Ignore src folder in gitignore

#135 KirstieJane closed 5 years ago
0
remove covars columns from df_residuals

#134 Islast closed 5 years ago
0
Cut covars columns from residuals matrix

#133 Islast closed 5 years ago
1
Which version of nilearn do we need?

#132 KirstieJane opened 5 years ago
1
Include small world in plot_network_measures

#131 KirstieJane opened 5 years ago
3
Set seed for Erdos Renyi graph in plot degree distribution

#130 KirstieJane closed 5 years ago
4
Pad random graphs with 0s so they are in the right order

#129 KirstieJane opened 5 years ago
4
Adjust installation instructions

#128 KirstieJane closed 5 years ago
0
calculate_nodal_measures doesn't work on graph bundles

#127 KirstieJane opened 5 years ago
1
Add padding to the colorbar at the bottom

#126 wingedRuslan opened 5 years ago
3
Split brain networks

#125 Islast opened 5 years ago
0
Error Bars for plotting measures

#124 wingedRuslan opened 5 years ago
10
Calculate nodal measures (function) doesn't include the module partition (but class does?)

#123 KirstieJane opened 5 years ago
1
Recreate top two images in summary figure

#122 Islast opened 5 years ago
6
Implementation of visualisation tools

#121 wingedRuslan closed 5 years ago
10
contributing docs updates

#120 Islast closed 5 years ago
3
Feedback on created visualisations

#119 wingedRuslan closed 5 years ago
2
Plot Network Measures

#118 wingedRuslan closed 5 years ago
3
import inside functions

#117 wingedRuslan closed 5 years ago
6
[KeepUpdating] Documenting code in scripts/make_figures.py

#116 wingedRuslan opened 5 years ago
0
[KeepUpdating] Help to understand parameters

#115 wingedRuslan opened 5 years ago
2
rich_club function not defined as expected

#114 wingedRuslan opened 5 years ago
2
Review of functions in make_figures.py

#113 wingedRuslan opened 5 years ago
1
Review of functions in nilearn_plotting.py

#112 wingedRuslan opened 5 years ago
0
Lots of warnings when running test suite

#111 sgibson91 closed 4 years ago
7
Update Development guide: Installation instructions

#110 sgibson91 opened 5 years ago
5
Integration test currently broken

#109 KirstieJane opened 5 years ago
5
Update view_corr_mat in visualisation commands and Update the introduction page in docs

#108 wingedRuslan closed 5 years ago
1