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WormBase
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ACKnowledge
Author Curation to Knowledgebases
MIT License
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show diff even if author has not modified any data
#102
valearna
closed
5 years ago
3
remove 'yeast' from species aliases
#92
valearna
closed
2 years ago
8
do not process papers if older than a year
#2
valearna
closed
5 years ago
2
list papers for author even if it's not the corresponding author
#96
valearna
closed
5 years ago
11
fix type in 'paper with no entities' email title
#90
valearna
closed
5 years ago
1
WBPaper00054648 - didn't extract C. elegans as species
#104
vanaukenk
closed
4 years ago
4
Show list of 'empty' papers processed by the pipeline in the paper lists page
#89
valearna
closed
5 years ago
2
link to dashboard broken
#3
draciti
closed
5 years ago
1
restrict access based on IP address/domain
#91
valearna
closed
5 years ago
3
modify e-mail template
#94
draciti
closed
5 years ago
2
Create a page on WormBase website where each logged-in author can see all her papers processed by AFP
#95
valearna
closed
4 years ago
4
Create a pipeline to send reminders to authors that have not submitted or have incomplete submissions
#101
valearna
closed
5 years ago
8
Clear paper search field in lateral menu after paper is loaded
#79
valearna
closed
5 years ago
1
show a 'loading' spinner when 'submit' button is clicked
#81
valearna
closed
5 years ago
1
Add link to the dashboard in the e-mail notification when an author completes the submission
#76
draciti
closed
5 years ago
1
Search list of papers by data type
#77
valearna
closed
5 years ago
1
Add link to paper on pubmed from paper viewer
#78
valearna
closed
5 years ago
2
Add author added text for any field in e-mail alert monthly digest
#82
draciti
closed
5 years ago
1
Add link to dashboard in e-mail notification
#75
draciti
closed
5 years ago
1
Why mouse is extracted in Paper 00056423
#4
draciti
closed
5 years ago
2
add go to specific page number in papers list pagination
#85
valearna
closed
5 years ago
2
do not process temp papers
#80
valearna
closed
5 years ago
1
Dashboard for 00056075
#74
draciti
closed
5 years ago
0
add paper info at the top of the 'paper status' page
#86
valearna
closed
5 years ago
0
remove tabs from 'paper lists' page
#84
valearna
closed
5 years ago
0
Link to doi instead of pubmed
#83
valearna
closed
5 years ago
0
Create a report page to compare data extracted by pipeline vs. data submitted by authors
#72
valearna
closed
5 years ago
1
add link to AFP form to notification email for new data submission
#71
valearna
closed
5 years ago
0
If no entities are extracted send email to admins and do not email author
#87
valearna
closed
5 years ago
0
Split 'Update contact info and lineage' into two separate actions?
#65
vanaukenk
closed
5 years ago
4
Matching gene synonyms now produces false positives
#70
vanaukenk
closed
5 years ago
4
add component to request new gene name
#68
valearna
closed
5 years ago
1
do not process papers with more than n extracted entities
#99
valearna
closed
4 years ago
7
error message when submitting data for paper 56066
#40
valearna
closed
5 years ago
3
Update text above boxes for WB entities
#63
vanaukenk
closed
5 years ago
0
extract only "Live" alleles
#54
valearna
closed
5 years ago
1
Gene srf-3 not recognized in WBPaper00056075
#62
vanaukenk
closed
5 years ago
2
transgenes and variations overlap- Paper00056039
#59
draciti
closed
5 years ago
5
juIs821- not found in main text -Paper00056039
#53
draciti
closed
5 years ago
1
Strains not extracted -Paper 00056039
#97
draciti
closed
4 years ago
10
Genes not extracted -Paper 00056039
#58
draciti
closed
5 years ago
4
WBPaper00056091-wyIs1330
#52
draciti
closed
5 years ago
2
some gk alleles not recognized
#66
draciti
closed
5 years ago
5
Some species are almost always extracted
#67
valearna
closed
5 years ago
5
add question mark with info about the extraction algorithm
#61
valearna
closed
5 years ago
5
whitespaces added arounf dashes for some papers during fulltext extraction
#57
valearna
closed
5 years ago
2
wrong species extracted
#60
valearna
closed
5 years ago
3
extract papers from production pipeline for testing
#64
valearna
closed
5 years ago
7
Strategy for beta testing with authors
#88
vanaukenk
closed
5 years ago
3
Genes for 53123
#41
vanaukenk
closed
5 years ago
1
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