WormBase ACKnowledge issues

WormBase / ACKnowledge

Author Curation to Knowledgebases

MIT License

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issues

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Extract alleles and strains only if they have corresponding genes in the list of genes extracted for the paper

#166 valearna closed 4 years ago
0
'C. tropicalis' not recognized with simple thresholds and tfidf

#165 draciti closed 3 years ago
12
Extract genes from all C. elegans papers with TFIDF=10 and save the results to pap_gene

#164 valearna opened 4 years ago
1
Text changes for V2.0

#163 draciti closed 4 years ago
2
Add support for multiple contributors

#162 valearna closed 4 years ago
1
Add button to request new WB person ID from author selection modal

#161 valearna closed 4 years ago
5
Send email address extracted from paper and not email in WB if different

#160 valearna closed 4 years ago
0
Add a 'Help and more info' widget

#159 draciti closed 3 years ago
5
Add a contact button at the top-right of the page

#158 draciti closed 4 years ago
1
Blacklist email addresses from bounced emails

#157 valearna closed 4 years ago
1
Add date and time of request email

#156 valearna closed 4 years ago
0
add entities if matched in abstract

#155 valearna closed 4 years ago
0
Monthly digest emails not easy to read and maybe wrong?

#154 valearna closed 3 years ago
0
00057211 on dev site

#153 draciti closed 4 years ago
4
transgene synonym instead of public name is displayed- Paper00057211

#152 draciti closed 4 years ago
3
C elegans not extracted in Paper00057211

#151 draciti closed 4 years ago
1
Add pie chart with number of added entities by journal

#150 valearna opened 4 years ago
2
Create a dashboard page with the most added and removed entities

#149 valearna closed 3 years ago
1
Use redux to manage feedback form state variables

#148 valearna closed 4 years ago
0
Exclude papers already curated from monthly notifications

#147 valearna closed 3 years ago
1
Some gene entries not properly formatted in paper editor

#146 vanaukenk closed 4 years ago
3
Update transgene question mark to specify that we want to capture both extrachomosomal arrays and integrated transgenes

#145 valearna closed 5 years ago
1
add a tag to the ?Paper model to capture AFP information.

#144 draciti closed 4 years ago
6
add C. elegans to the species list by default

#143 valearna closed 4 years ago
1
add option to 'AND' or 'OR' filters in paper lists page

#142 valearna closed 4 years ago
0
improve to the dashboard UI

#141 valearna closed 4 years ago
0
Create a black list of genes with a high probability of being false positives

#140 valearna closed 4 years ago
3
entities not extracted for 56554

#139 draciti closed 5 years ago
2
Should we process papers if only supplemental material is extracted but not the main paper?

#138 valearna closed 5 years ago
3
spe-6 not extracted from 54685

#137 vanaukenk closed 5 years ago
3
55920 entities not extracted

#136 draciti closed 5 years ago
2
e1364 not extracted- paper 56695

#135 draciti closed 5 years ago
3
New alleles submitted via AFP

#134 draciti closed 3 years ago
4
00056956- author added hsp-16.2, why?

#133 draciti closed 4 years ago
2
Paper 57005, gene extraction problem

#132 draciti closed 5 years ago
2
paper 56901 - nhr-47 extracted instead of csr-1

#131 valearna closed 5 years ago
2
Unable to view comments in dashboard

#130 vanaukenk closed 5 years ago
2
Integrate curation status with author paper page

#129 vanaukenk opened 5 years ago
0
C elegans appears as removed and then added by authors in the dashboard diff

#128 valearna closed 5 years ago
1
add expression svm value to dashboard

#127 valearna closed 5 years ago
1
To improve author's response- list of e-mail addresses

#126 draciti closed 4 years ago
2
broken link Paper00054441 in partial submissions

#125 draciti closed 5 years ago
2
add page with list of authors and papers counters (processed, submitted, partial sub) to the curator dashboard

#124 valearna closed 4 years ago
2
Add author name in the e-mail 'New AFP data submitted by author'

#123 draciti closed 5 years ago
1
Community outreach

#122 draciti opened 5 years ago
4
To discuss: present interconnected data in a single table

#121 vanaukenk opened 5 years ago
2
Comparison between OLD and NEW pipelines

#120 draciti closed 5 years ago
2
Get a list of authors that participated now and before

#119 draciti closed 4 years ago
1
link to paper when no PMID available does not appear on author form

#118 valearna closed 5 years ago
2
manage micropublications

#117 valearna closed 5 years ago
1

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