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YangLab
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CIRCexplorer2
circular RNA analysis toolset
http://circexplorer2.readthedocs.org/
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Changes required for Python 3.x compatibility
#25
lardenoije
closed
5 years ago
2
AS detection error in CIRCExxplorer2 devono?
#24
tw7649116
closed
5 years ago
2
Questions in parsing tophat-fusion mapping results with stranded RNA-seq
#23
broadax
closed
5 years ago
0
IndexError: list index out of range
#22
ghost
closed
5 years ago
4
Idea about using STAR Chimeric.out.junction file for circRNA alternative splicing analysis
#21
kepbod
closed
4 years ago
1
a question about align
#20
weishuxun
closed
6 years ago
1
Is it possible to use assemble function with STAR output?
#19
qoiopipq
closed
6 years ago
1
Apparent problem with pybedtools binaries after PIP download
#18
illWill
closed
6 years ago
1
Issues with fetch_ucsc.py
#17
harshameghadri
closed
6 years ago
1
CIRCexplorer2 support hisat2
#16
weizhiting
closed
6 years ago
6
gtf to txt conversion
#15
tut3
closed
6 years ago
1
Deal with last comma of exonStarts and exonEnds
#14
Tong-Chen
closed
6 years ago
1
No module named dir_func
#13
maojn
closed
6 years ago
1
ImportError: libbz2.so.1.0: cannot open shared object file: No such file or directory
#12
maojn
closed
6 years ago
0
Annotate ouput
#11
zoewardnz
closed
6 years ago
1
support python 3
#10
kepbod
closed
6 years ago
4
CIRCexplorer2 support for STAR paired-end reads
#9
iprada
closed
7 years ago
3
Convert to Python3
#8
ralic
closed
7 years ago
1
Using StringTie instead of cufflinks for circRNA assembly
#7
kepbod
closed
6 years ago
0
Annotated 0 fusion junctions
#6
snehamurthy21
closed
7 years ago
1
CIRCexplorer2 annotate doesn't support multiple rows command
#5
gnilihzeux
closed
7 years ago
1
can't continue 'Annotating'
#4
gnilihzeux
closed
7 years ago
6
error about CIRCexplorer2 annotate
#3
smm19900210
closed
7 years ago
4
about alternative (back-)splicing events detection
#2
smm19900210
closed
7 years ago
5
a problem on circexplorer2
#1
noahpieta
closed
8 years ago
5
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