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agroportal
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project-management
Repository used to consolidate documentation about the AgroPortal project and track content related issues.
http://agroportal.lirmm.fr
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GR-TAX has lost its submission
#437
jonquet
closed
9 months ago
1
NCBITAXON clean up
#436
jonquet
closed
8 months ago
2
Remove a few ontologies from AgroPortal
#435
jonquet
opened
9 months ago
4
Chargement d'une soumission pour VBO ne fonctionne pas
#434
jonquet
closed
9 months ago
2
Identifier pattern should be automatically filled by AgroPortal
#433
hibadjebabria169
opened
11 months ago
0
Import FCU_TAXREF SSSOM mappings
#432
syphax-bouazzouni
opened
11 months ago
0
SSSOM mapping services
#431
syphax-bouazzouni
opened
11 months ago
0
AgroPortal should be the catalog by default for all ontologies
#430
hibadjebabria169
opened
11 months ago
0
Metadata Administration : Select all properties when the input is empty
#429
hibadjebabria169
closed
3 months ago
2
Using mostly AGROVOC terms to annotate other semantic resources (hasDomain property)
#428
jonquet
opened
11 months ago
2
Removing mappings generate mapping retrieval error
#427
jonquet
closed
3 days ago
4
Probleme de navigation pour FoodEx 2
#426
jonquet
closed
5 months ago
2
Expected behaviour with multiple mapped properties with different types
#425
jonquet
closed
12 months ago
7
Edition de la métadonnées en échec supprime le lien a la soumission
#424
jonquet
closed
9 months ago
6
Automatic extraction of metadata, new iteration
#423
jonquet
opened
1 year ago
0
Update ontoportal groups/categories administration
#422
syphax-bouazzouni
closed
5 months ago
5
Metadata vocabulary used : automate the population of this property by looking at the namespace declared inside the source file
#421
hibadjebabria169
opened
1 year ago
0
unable to set null for some fields (e.g. object description properties , dates)
#420
hibadjebabria169
opened
1 year ago
1
Bug: update submission metadata trigger a submission process notification
#419
syphax-bouazzouni
closed
6 months ago
1
2023-Q2-Release plan
#418
syphax-bouazzouni
closed
6 months ago
1
Disable the automatic fallback feature on the Object description properties
#417
hibadjebabria169
opened
1 year ago
1
How to view the list of concepts in a collection at one sight?
#416
saubin78
closed
6 months ago
4
Generic Type : Multiple ontologies don't provide a type in AgroPortal
#415
hibadjebabria169
opened
1 year ago
0
SKOS resources hierarchy defined with narrower (skos:narrower) properties are not parsed
#414
jonquet
opened
1 year ago
2
Populate the notes for concept using the information in skos:note properties
#413
jonquet
opened
1 year ago
0
Seems also that the Annotator semantic expansion with is-a hierarchy does not work with SKOS vocabularies.
#412
jonquet
opened
1 year ago
0
Complete and update the Agroportal submission metamodel 2023 - Part 2
#411
syphax-bouazzouni
closed
6 months ago
1
Complete and update the Agroportal submission metamodel 2023 - Part 1
#410
syphax-bouazzouni
closed
6 months ago
2
Complete and update the Agroportal submission metamodel 2023
#409
syphax-bouazzouni
closed
6 months ago
0
Lock Centos, Ontoportal (and others if needed) to not direct login in our servers
#408
syphax-bouazzouni
closed
1 year ago
1
Update our infrastructure and deployment infrastructure
#407
syphax-bouazzouni
opened
1 year ago
0
TEMP URI for the obo foundry ontologies
#406
hibadjebabria169
closed
1 year ago
2
Double "Other" value in the syntax property
#405
hibadjebabria169
closed
1 year ago
1
Preferred namespace URI ==> Replace the string value by the URL in the submission 11 of PPEO
#404
hibadjebabria169
closed
1 year ago
1
SKOS resources that do not declare owl:Ontology object
#403
jonquet
opened
1 year ago
1
Add GitHub action to sync to our local master to the upstream ontoportal-lirmm branch that will make automatically the two branches always synchronized
#402
syphax-bouazzouni
opened
1 year ago
0
Add GitHub action to sync to upstream master that will create automatically a pull request when the upstream branches get updated
#401
syphax-bouazzouni
opened
1 year ago
0
add `deployer` user in the servers
#400
syphax-bouazzouni
opened
1 year ago
0
Forward logs using the infrastructure agent.
#399
syphax-bouazzouni
closed
1 year ago
1
Manually match the LBO version info in BioPortal with the versions info we have in AgroPortal
#397
jonquet
opened
1 year ago
1
Erase the http://purl.obolibrary.org/obo/TEMP URI automatically value generated by OWL-API
#396
jonquet
opened
1 year ago
2
Add the New Relic configuration to the project to enable monitoring.
#395
syphax-bouazzouni
closed
1 year ago
2
Fix ncbo proxy and annotator after the transition to HTTPS
#394
syphax-bouazzouni
closed
1 year ago
2
Add metadata relation rules
#393
hibadjebabria169
opened
1 year ago
3
AgroPortal metadata curation_2023_ontologies
#392
hibadjebabria169
closed
3 months ago
1
Change relation btw ontologies in metadata from data.agroportal URLs to UI URLs
#391
jonquet
closed
2 months ago
4
Root resources ==> GAO ontology : replace the string items by their URI
#390
hibadjebabria169
opened
1 year ago
2
Metadata vocabulary used ==> automate the population of this property by looking at the namespace declared inside the source file
#389
hibadjebabria169
opened
1 year ago
0
Change the values of metadata properties with range=classes to the corresponding URIs (in the concerned ontology) so that it respects the class_validator
#388
hibadjebabria169
opened
1 year ago
2
Preferred namespace URI ==> Implement a feature to detect the pattern of URIs and fill this property automatically
#387
hibadjebabria169
opened
1 year ago
2
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