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all-of-us
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workbench-snippets
Code snippets for use in All of Us Workbench notebooks.
BSD 3-Clause "New" or "Revised" License
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[RW-9892][risk=low] Update Cromwell snippet to replace cromshell-beta with Cromshell
#86
yonghaoy
closed
1 year ago
2
R Snippet is setting leo url as an array causing cromshell submit to fail
#85
NehaBroad
closed
1 year ago
1
Nsaxena/cromwell error
#84
NehaBroad
closed
1 year ago
0
Fix cromwell snippet to use cromshell-alpha instead of cromshell_alpha
#83
NehaBroad
closed
1 year ago
0
Unable to access cromshell_config.json if cromwell_server is set to empty string
#82
NehaBroad
closed
1 year ago
0
[RW-9753][risk=no]Cromwell snippet missing from Jupyter R notebook
#81
NehaBroad
closed
1 year ago
0
[RW-9741][risk=low]: Update code snippet to support cromshell alpha and beta
#80
yonghaoy
closed
1 year ago
1
Improve error handling when copying to/from bucket
#79
cgarbin
closed
11 months ago
0
Cromwell script: Handle error if cromshell is not running
#78
NehaBroad
closed
1 year ago
0
Snippet for checking and updating cromshell server for AoU
#77
NehaBroad
closed
1 year ago
0
R cohort codegen sample
#76
calbach
closed
2 years ago
10
Parallelize retrieval of snapshot comments.
#75
deflaux
closed
2 years ago
1
Bring snippets up to date.
#74
deflaux
closed
2 years ago
0
Update dataset builder snippets to be compatible with the newer autogenerated SQL.
#73
deflaux
closed
2 years ago
0
Update measurements plots to show sex_at_birth instead of gender.
#72
deflaux
closed
2 years ago
0
Rename default branch
#71
deflaux
closed
2 years ago
0
[Snyk] Security upgrade pylint from 1.7.2 to 2.7.0
#70
snyk-bot
opened
2 years ago
2
Document development and testing of Terra widgets.
#69
deflaux
opened
3 years ago
0
Remove tensorflow dependency.
#68
deflaux
closed
3 years ago
1
IA-2686 downgrade tensorflow version requirement
#67
Qi77Qi
closed
3 years ago
0
update tensorflow requirement
#66
Qi77Qi
closed
3 years ago
2
Require only tensorflow support for cpus.
#65
deflaux
closed
3 years ago
0
Print output from gsutil when copying file or data to the bucket
#64
rfrancis1
closed
3 years ago
0
Permanent file storage in the bucket
#63
rfrancis1
closed
3 years ago
0
Update lower bound for tensorflow to be a release.
#62
deflaux
closed
3 years ago
0
Update the default measurement of interest to be Hemoglobin A1c.
#61
deflaux
closed
3 years ago
0
Remove obsolete comments.
#60
deflaux
closed
3 years ago
0
Update the smoke test dataset
#59
deflaux
closed
3 years ago
0
Bring the snippets smoke tests up to date.
#58
deflaux
closed
3 years ago
0
Convert to `html` instead of `html_toc` for HTML snapshots.
#57
deflaux
closed
3 years ago
1
Restore use of export format `html_toc`.
#56
deflaux
opened
3 years ago
1
modify type of question concept id from integer64 to number
#55
rfrancis1
closed
3 years ago
2
Speed up the 'view all comments' widget.
#54
deflaux
closed
2 years ago
0
Add implicit pyyaml requirement for build process
#53
calbach
closed
4 years ago
0
Update link to snippets user documentation.
#52
deflaux
closed
4 years ago
0
Move display option changes out of the global scope.
#51
deflaux
closed
4 years ago
0
Add Python package containing 'HTML snapshots' user interface.
#50
deflaux
closed
4 years ago
2
Add recursive option when listing directories in bucket
#49
rfrancis1
closed
4 years ago
1
Survey dist snippet
#48
rfrancis1
closed
4 years ago
1
Print list objects
#47
rfrancis1
closed
4 years ago
0
Delete pandas profiling pip
#46
rfrancis1
closed
4 years ago
1
List files in bucket
#45
rfrancis1
closed
4 years ago
0
Remove statsmodels upgrade
#44
deflaux
closed
4 years ago
1
Copy to or from the Google Bucket
#43
rfrancis1
closed
4 years ago
0
Replace Measurement Datetime with Measurement Date
#42
rfrancis1
opened
4 years ago
0
Enable smoke testing for Dataset Builder snippets.
#41
deflaux
closed
4 years ago
0
Use WORKSPACE_CDR environment variable.
#40
deflaux
closed
4 years ago
0
Add git instructions
#39
deflaux
closed
4 years ago
0
Fix errors, missing quote and name typos in plots
#38
rfrancis1
closed
4 years ago
1
Update age in measurements
#37
rfrancis1
closed
4 years ago
0
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