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bacpop
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ska.rust
Split k-mer analysis – version 2
https://docs.rs/ska/latest/ska/
Apache License 2.0
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add back ska distance and ska annotate?
#25
cammo0p
closed
1 year ago
5
Add 'reverse' weed to keep only selected split k-mers
#24
johnlees
closed
1 year ago
1
Do you have an estimated RAM usage per sample?
#23
danrlu
closed
1 year ago
3
Partial loading of skf
#22
johnlees
closed
12 months ago
2
Move test dependencies to test only
#21
johnlees
closed
1 year ago
1
Faster filter for reads
#20
johnlees
closed
1 year ago
1
Memory optimisation: don't store whole build array
#19
johnlees
closed
1 year ago
2
Add tutorial with use cases
#18
johnlees
closed
7 months ago
1
Alternatives for .skf format
#17
johnlees
closed
12 months ago
6
Add more types of quality score filtering
#16
johnlees
closed
1 year ago
1
README update
#15
johnlees
closed
1 year ago
1
Replace hashes with nthash
#14
johnlees
closed
1 year ago
0
Add support for up to k=63 using u128
#13
johnlees
closed
1 year ago
2
Actually need to remove second version check on tag push
#12
johnlees
closed
1 year ago
0
Add a test of version number increase to gha
#11
johnlees
closed
1 year ago
0
Add middle base to read count filtering
#10
johnlees
closed
1 year ago
1
Add more alignment filtering options
#9
johnlees
closed
1 year ago
1
Add logo to readme
#8
johnlees
closed
1 year ago
1
Add logo
#7
johnlees
closed
1 year ago
0
Try adding codecov
#6
johnlees
closed
1 year ago
1
Add ambiguous genotypes in VCF output
#5
johnlees
opened
1 year ago
1
Support k up to 63
#4
johnlees
closed
1 year ago
1
Add actions to automate release
#3
johnlees
closed
1 year ago
0
Redo the alignment writer for ska map
#2
johnlees
closed
1 year ago
0
Try clippy gha
#1
johnlees
closed
1 year ago
0
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