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bebop
/
poly
A Go package for engineering organisms.
https://pkg.go.dev/github.com/bebop/poly
MIT License
659
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68
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Methylated GoldenGates
#391
Koeng101
closed
7 months ago
4
Simulate enzyme methylation through lowercasing
#390
Koeng101
closed
7 months ago
0
Genbank parser fixes
#389
abondrn
closed
8 months ago
1
Genbank import and export from JSON should include feature sequences
#388
Koeng101
closed
7 months ago
2
Add FragmentWithOverhangs
#387
Koeng101
closed
8 months ago
3
patched genbank parser and builder to handle BASE COUNT.
#386
TimothyStiles
closed
9 months ago
0
created parser regression test for nested sublocations.
#385
TimothyStiles
closed
9 months ago
0
Genbank location parser breaks on parsing this location.
#384
TimothyStiles
closed
9 months ago
1
Genbank parser doesn't handle feature attributes with colliding names.
#383
TimothyStiles
opened
9 months ago
5
Hacktoberfest Scratchpad
#382
abondrn
closed
9 months ago
0
Concurrent mashing
#380
Koeng101
closed
7 months ago
2
Fix YAML syntax error in take.yml
#379
carreter
closed
9 months ago
0
Fix PCR bug (issue #279).
#378
carreter
closed
9 months ago
0
Allow non-contributors to take an issue with .take
#377
carreter
closed
9 months ago
0
Document all these workflow changes in `CONTRIBUTING.md`
#375
carreter
closed
9 months ago
1
Reduce number of reviewers necessary for merge
#372
carreter
closed
7 months ago
5
Add `CHANGELOG.md` with current unreleased changes.
#371
carreter
closed
9 months ago
0
Add a pull request template.
#370
carreter
closed
9 months ago
0
This project should have a `CHANGELOG.md`
#369
carreter
closed
9 months ago
1
Update issue templates and disable blank issues.
#368
carreter
closed
9 months ago
0
Refactor `clone` package
#367
carreter
opened
9 months ago
5
Create Automated Benchmarking Suite
#366
TimothyStiles
opened
9 months ago
5
Move pipelines to more reproducible platform with less YAML
#365
TimothyStiles
closed
6 months ago
14
Improve and standardize parsing API
#364
carreter
opened
9 months ago
1
Write more thorough explanation of alignment algorithms in align.go
#363
carreter
opened
9 months ago
1
Create a tutorial series around a real-world, working example
#362
carreter
opened
9 months ago
4
Implement LinearFold for prediction of RNA secondary structure
#361
carreter
opened
9 months ago
6
Implement Burrows-Wheeler transform
#360
carreter
closed
5 months ago
5
Implement Gibson Assembly
#359
carreter
opened
9 months ago
5
Add the poly Google group email as a method of contact.
#358
carreter
closed
8 months ago
2
Add a CIF parser
#357
carreter
opened
9 months ago
1
MASH template matching
#356
Koeng101
closed
7 months ago
2
Pileup parsing deletion with .
#355
Koeng101
opened
9 months ago
4
Mark issues and PRs as stale after 2 months
#354
carreter
closed
9 months ago
0
Add "blocked by" relationships between issues/PRs
#353
carreter
closed
9 months ago
0
`Feature.GetSequence()` always returns a nil error value
#352
carreter
opened
9 months ago
7
Common Genbank `Feature.Type` values should be enumerated
#351
carreter
opened
9 months ago
4
Add stats to codon tables
#350
cachemoi
closed
8 months ago
11
Biowasm minimap2/samtools integration
#349
Koeng101
closed
7 months ago
3
Enable line-length linter `lll` for comments
#348
carreter
closed
9 months ago
1
Create top-level `types.go` to define types shared across packages
#347
carreter
opened
10 months ago
6
Improvements to issue/PR labeling/management
#346
carreter
opened
10 months ago
16
`CODE_OF_CONDUCT.md` missing contact under Enforcement section
#345
carreter
closed
8 months ago
8
created a super minimal mash function for sketching sequences.
#344
TimothyStiles
closed
9 months ago
4
Re-enable golangci-lint.yml, turn on linters, and lint.
#343
carreter
closed
10 months ago
0
`Gff.AddFeature()` code is misleading and mutates `Feature` state
#342
carreter
opened
10 months ago
5
Add svb compression to slow5
#341
Koeng101
closed
10 months ago
4
Add a newline normalizing wrapper for io.Readers
#340
carreter
opened
10 months ago
10
io->bio
#339
Koeng101
closed
7 months ago
29
improvement of fastq and fasta
#338
Koeng101
closed
10 months ago
2
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