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bihealth
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cubi-isa-templates
CUBI ISA-Tab templates
MIT License
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feat: Simplify mass cytometry template
#41
sellth
closed
3 months ago
0
add olink template
#40
sellth
opened
4 months ago
0
Switch to release-please for versioning
#39
sellth
opened
8 months ago
0
fix: File name slash sanitization (#37)
#38
mikkonie
closed
8 months ago
0
Slash characters in investigation title not sanitized for assay file names
#37
mikkonie
closed
8 months ago
2
feat: Update ms_meta template
#36
sellth
opened
11 months ago
0
fix: Library prefix is called Fastq prefix in assays file
#35
sellth
closed
11 months ago
1
Update Somatic template
#34
sellth
opened
11 months ago
0
fix: bulk_rnaseq template used wrong configuration
#33
sellth
closed
12 months ago
0
update changelog
#32
sellth
closed
1 year ago
0
remove ontology URI workaround
#31
sellth
closed
1 year ago
0
fix: Conform with style guidelines and update cookiecutter
#30
sellth
closed
1 year ago
0
prepare build for release
#29
sellth
closed
1 year ago
0
Terminology updates for MC template
#28
sellth
closed
1 year ago
0
Add versioneer versioning
#27
sellth
closed
1 year ago
0
Add template usage documentation
#26
sellth
opened
1 year ago
0
Update CHANGELOG.md
#25
sellth
closed
1 year ago
0
Explore `Assay Name` as ISA-compliant replacement of `Library Name`
#24
sellth
opened
1 year ago
1
Add new template: Somatic
#23
sellth
closed
1 year ago
0
Remove unused values from cookiecutter.json
#22
sellth
opened
1 year ago
0
Add CI
#21
sellth
closed
1 year ago
1
Add new isatab template 'cancer'
#20
sellth
closed
1 year ago
0
fix tumor_normal templates
#19
sellth
closed
1 year ago
0
fix failing test
#18
sellth
closed
1 year ago
0
mark internal variables as private
#17
sellth
closed
1 year ago
0
Convert special variables to private
#16
sellth
closed
1 year ago
0
Update mass cytometry template
#15
sellth
closed
1 year ago
0
fix: consistently use mass_cytometry as template name
#14
sellth
closed
1 year ago
0
fix: make variable naming consistent with ISA standard
#13
sellth
opened
1 year ago
4
Add template validation tests
#12
sellth
closed
1 year ago
1
remove stem_cell_core template
#11
sellth
closed
1 year ago
0
fix broken symlinks
#10
sellth
closed
1 year ago
0
set default value for cellline
#9
sellth
closed
1 year ago
3
Template "stem_cell_core" not defined in _TEMPLATES
#8
mikkonie
closed
1 year ago
1
AltamISA parsing fails with template "tumor_normal_dna"
#7
mikkonie
closed
1 year ago
0
AltamISA parsing fails with template "stem_cell_core_sc"
#6
mikkonie
closed
1 year ago
0
AltamISA parsing fails with template "stem_cell_core_bulk"
#5
mikkonie
closed
1 year ago
0
add CyTOF ISA template
#4
sellth
closed
1 year ago
0
Update templates for ISA model compatibility
#3
mikkonie
closed
1 year ago
1
Add tests and CI
#2
mikkonie
closed
1 year ago
2
Add versioneer versioning
#1
mikkonie
closed
1 year ago
1