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biostar-handbook
Issue tracker for the Biostar Handbook
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Problem with bioinformatic environment
#125
Wisnerlee
closed
4 years ago
5
Problems installing the bioinformatics software
#124
Corwyn-A
closed
4 years ago
1
samtools: library not loaded
#123
kwhiggins27
closed
4 years ago
4
blast database issue
#122
nathanerank
opened
4 years ago
7
Hell
#121
Biostarhill
closed
2 years ago
1
wget not working
#120
Biostarhill
closed
4 years ago
6
Miniconda download issues
#119
stephaniehall123
closed
4 years ago
3
metadata.yaml from Recipe:Download the Data has different contents than expected
#118
mgshapiro100
opened
4 years ago
5
bash permission denied
#117
mt0030
closed
4 years ago
2
Could not initiate conda
#116
mt0030
closed
4 years ago
1
Failed to download human_genome blast database by update_blastdb.pl human_genome --decompress
#115
arriyaz
closed
4 years ago
4
conda?
#114
xuep2
opened
4 years ago
13
Data compression: Small typo
#113
sffeng
opened
4 years ago
0
corona virus analysis
#112
njbowen
closed
4 years ago
1
corona virus
#111
njbowen
closed
4 years ago
1
corona virus analysis
#110
njbowen
closed
4 years ago
1
RNA-seq by example: Cannot visualise heatmap
#109
AnthonyDohertyTCD
closed
4 years ago
30
Preparing environment for the differential expression analysis
#108
AnthonyDohertyTCD
closed
4 years ago
1
Coronavirus Genome Analysis Guide issue with reformat.py
#107
Stautis
closed
4 years ago
4
RNA-seq by example hanbdook -> heatmap.r error cannot visualize heatmap
#106
choijamtsmunkhzul
closed
4 years ago
2
deseq1.r vs deseq2.r vs edger.r list of genes in raw output
#105
njbowen
closed
4 years ago
1
deseq2.r header comments still say edgeR
#104
njbowen
closed
4 years ago
1
DESeq problem!!
#103
choijamtsmunkhzul
closed
4 years ago
2
RNA-Seq by example - 5. Classification based RNA-Seq - not clear example adding reads
#102
mantvydasl
closed
4 years ago
1
RNAseq book- 4. Alignment based RNA-Seq: Create coverage data - "Couldn't open .fai"
#101
misterchristoff1
closed
4 years ago
4
xtract command: can not execute binary file
#100
nkuperwasser
closed
4 years ago
5
Guide for contributions
#99
bsipos
closed
4 years ago
6
using efetch for Entrez direct (Entrez Direct by Example chapter)
#98
eflasch
closed
4 years ago
1
DEseq R code problem
#97
theokirkland
closed
4 years ago
6
bwa alignment
#96
theokirkland
closed
4 years ago
3
using makefiles
#95
eflasch
closed
4 years ago
4
Ubuntu start up error
#94
fanzhaom
closed
4 years ago
12
Startup issues
#93
theokirkland
closed
4 years ago
4
setup windows 8
#92
gsk7757
closed
5 years ago
6
Problems with SRA: "curl: (9) Server denied you to change to the given directory"
#91
gabrielhim
closed
4 years ago
2
Chapter VI visualizing example issue AF086833
#90
MirrorReaper
closed
5 years ago
4
“Bash Unix for Windows.”
#89
julianstanley
closed
5 years ago
1
Formatting pg. 74
#88
julianstanley
closed
5 years ago
1
Lengthy code lines are overflowing in PDF
#87
ilaydabozan
opened
5 years ago
9
Bioinformatics Tool Installation 8.9
#86
sebastianjuhl
closed
5 years ago
2
SSL module is not avavilable
#85
criscruz43
closed
4 years ago
11
miniconda installation: could not resolve host
#84
HMcBain
closed
5 years ago
8
`dwgsim` is used in "Introduction to Variant Calling" but not listed in list of packages to install in conda environment
#83
RamRS
closed
5 years ago
3
efetch, Missing idxfile for option -i
#82
CatChenal
closed
5 years ago
2
curl for bash setup seems to fail
#81
Sean-McCaffrey
closed
5 years ago
3
goa_human.gaf file headers counted as genes
#80
JWDebler
closed
5 years ago
1
Why links copied from ebook do not work in terminal?
#79
arriyaz
closed
5 years ago
5
When I should start learning python? After completing this book or before ?
#78
arriyaz
closed
5 years ago
1
compiled SRA download and unpack
#77
njbowen
closed
5 years ago
2
Lecture 3 Link to Genomic surveillance
#76
njbowen
closed
5 years ago
1
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