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biostar-handbook
Issue tracker for the Biostar Handbook
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samtools install error
#175
njbowen
closed
2 years ago
6
RNA-Seq by example the concept of FDR should be elaborated
#174
nirjharaloy
closed
2 years ago
2
RNA-seq by example chapter 6
#173
nirjharaloy
closed
2 years ago
12
Conda : command not found
#172
sandeepmadana
closed
2 years ago
2
RNA-Seq by example chapter 5: combining count matrix
#171
nirjharaloy
closed
2 years ago
3
Where is the physical location of ubuntu directory?
#170
nirjharaloy
closed
2 years ago
5
Trouble installing software from the link in windows 10
#169
nirjharaloy
closed
2 years ago
4
make vcf error (doctor.py in working order)
#168
eotf
closed
2 years ago
3
Installing Visual Studio
#167
eflasch
closed
2 years ago
1
Failed to install refgenie
#166
lsnsl123
closed
2 years ago
3
Installation problem
#165
eflasch
closed
2 years ago
3
doctor.py not found
#164
KenSaville
closed
2 years ago
15
Version 2.8.0 mismatch for: fastq-dump
#163
bhagyeshsarode
closed
2 years ago
2
Issues with running the DE analysis in the step-by-step tutorial (chapter 6)
#162
EMDLvdHeijden
closed
2 years ago
11
Fail to create conda environment
#161
Shane-Lin
closed
2 years ago
23
Setup problems when installing bioinformatic softwares from provided link
#160
LorenzoGallicchio
closed
3 years ago
2
code on p 451 gives error
#159
theokirkland
closed
2 years ago
1
Issues loading programs
#158
theokirkland
closed
3 years ago
3
Issues Setting Up
#157
Cmbarrows
closed
2 years ago
8
RNA-seq with deseq2 gives different result
#156
Stealsh
closed
3 years ago
4
Unable to connect to Entrez Direct
#155
tnbioinfo
closed
2 years ago
6
edger.r and deseq2.r
#154
njbowen
closed
3 years ago
2
Downloading blastdb nr database can't --decompress
#153
kuheng3
closed
2 years ago
4
transcript alignment generated with gffread against the reference
#152
Dzamuk
opened
3 years ago
0
Setting up conda
#151
srmcpher
closed
2 years ago
5
This book was originally written in March of 2019.
#150
njbowen
closed
3 years ago
0
issue with fastq-dump
#149
Dzamuk
closed
3 years ago
4
link not working
#148
njbowen
closed
3 years ago
1
Suggestion
#147
KONeill872
closed
3 years ago
2
Bin folder is not in your path
#146
dia-dd
closed
3 years ago
3
Stuck on how to install software when creating bioinformatics environment and updating conda package
#145
dia-dd
closed
3 years ago
11
issues with wget command and reinstalling Conda environment
#144
stephaniehall123
closed
3 years ago
2
Issue with genes.gff file in section 104.6 "What else can I do to refine the peaks?"
#143
ChristianKKelley
opened
3 years ago
0
Confusing writing with 3',5' ends in handbook Chapter 55.6 (pdf page 472)
#142
ChristianKKelley
closed
3 years ago
2
help with input/output error
#141
minlr
closed
3 years ago
2
Issues with setting up conda - windows
#140
whalera1901
closed
3 years ago
20
Minor suggestions
#139
colinbrislawn
opened
3 years ago
7
Issue installing gprofiler
#138
ialbert
opened
3 years ago
5
Datamash issue in X. GO, Understanding the GO data
#137
yeyuan98
closed
3 years ago
6
V BITS OF STATISTICS, Subsection "Statistics survival guide"
#136
yeyuan98
closed
3 years ago
4
installing bioconductor packages downgrades R
#135
kcivkulis
closed
3 years ago
3
samtools sort: truncated file. Aborting
#134
tiptophamza
opened
3 years ago
3
Fixing a wrong link
#133
yamaton
closed
3 years ago
1
Xargs signal error while installing bioinformatics tools
#132
tiptophamza
closed
3 years ago
7
I can't see the rootfs file in the very beginning
#131
poss5566
closed
4 years ago
3
I can't run the scripts deseq1.r, deseq2.r and edger.r
#130
arturomarin
opened
4 years ago
3
snpEFF ebola_zaire database not found
#129
KenSaville
closed
4 years ago
11
clustering corona sequences to trace origin
#128
KenSaville
opened
4 years ago
2
coronavirus taxonkit
#127
KenSaville
closed
4 years ago
1
RNA-Seq by Example, error in chapter 8
#126
darkocerdic
opened
4 years ago
1
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