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biosustain
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cameo
cameo - computer aided metabolic engineering & optimization
http://cameo.bio
Apache License 2.0
114
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Use the Seaborn library
#302
guillaume-gricourt
closed
1 year ago
0
Visualization using Seaborn
#301
guillaume-gricourt
closed
1 year ago
0
Use pandas.concat
#300
guillaume-gricourt
closed
1 year ago
0
Deprecated feature in cobrapy package
#299
almironeto
opened
2 years ago
1
Unable to run cameo design API
#298
SiYeon-Ju
opened
2 years ago
1
cannot import name 'find_gene_knockout_reactions'
#297
jetu20
closed
2 years ago
2
find_gene_knockout_reactions is deprecated in cobrapy 0.25.0
#296
glucksfall
opened
2 years ago
0
OptKnock does not run on the models. Attribute Error displayed.
#295
dahalsanjeev
opened
2 years ago
0
Fix/update universal models
#294
sruti-dammalapati
opened
2 years ago
1
try.cameo.bio broken
#293
jhgorse
closed
2 years ago
2
Pathway heterologous
#292
guillaume-gricourt
closed
1 year ago
0
optgene.run() not working with growth_coupled=True
#291
jafemm
opened
2 years ago
0
CPLEX failing on CI
#290
carrascomj
opened
3 years ago
0
Added plotter argument to PhenotypicPhasePlaneResult.plot()
#289
djinnome
opened
3 years ago
2
pathways.plot_production_envelopes() does not pass plotter to plot()
#288
djinnome
opened
3 years ago
0
Move escher to extras
#287
matthiaskoenig
opened
3 years ago
1
Release packages on pypi
#286
matthiaskoenig
closed
3 years ago
2
fix: set explicitly the auth tokens for twine
#285
carrascomj
closed
3 years ago
2
Merge devel into master
#284
phantomas1234
closed
3 years ago
0
"TypeError: plot() missing 1 required positional argument: 'plotter'"
#283
BeeAnka
closed
3 years ago
2
Fix openbabel test
#282
carrascomj
opened
3 years ago
0
Chore Update optlang to 1.5
#281
carrascomj
closed
3 years ago
2
Different knockouts strategies
#280
j-alex-vindel
opened
3 years ago
0
Error raised in the use of different strain design algorithms of Cameo.
#279
Priyachan
closed
3 years ago
2
Fix OptKnock when exluded reactions clash with blocked reactions
#278
carrascomj
closed
3 years ago
1
problems with exclude_reactions in OptKnock
#277
j-alex-vindel
closed
3 years ago
4
Docs enhance
#276
carrascomj
closed
3 years ago
1
Escher widget in jupyter sometimes works sometimes not
#275
katajar
closed
3 years ago
2
Docs binder badge
#274
carrascomj
closed
3 years ago
1
Refactor bounds behaviour
#273
carrascomj
closed
3 years ago
4
Fix plotting
#272
carrascomj
closed
3 years ago
1
Update escher functionality
#271
carrascomj
closed
3 years ago
0
Replace Travis with github actions
#270
carrascomj
closed
3 years ago
1
Problem with AttributeError in OPTNOCK
#269
Bknmn
closed
3 years ago
1
Update documentation
#268
carrascomj
opened
4 years ago
0
Deprecation sympy ups
#267
carrascomj
closed
4 years ago
6
Problem with SYMPY
#266
Bknmn
closed
3 years ago
4
Refactor plotting
#265
carrascomj
closed
4 years ago
1
Work towards new release
#264
phantomas1234
closed
4 years ago
0
Fix divison by 0
#263
carrascomj
closed
4 years ago
0
Chore upgrade all
#262
carrascomj
closed
4 years ago
1
error in doing differential flux variability analysis
#261
jinb88187
closed
4 years ago
0
solver(s) question
#260
picousse
opened
4 years ago
8
Update analysis.py
#259
matthiaskoenig
closed
4 years ago
4
No support for pathlib.Path on model loading
#258
matthiaskoenig
opened
4 years ago
0
Deprecation warnings on model import
#257
matthiaskoenig
closed
4 years ago
0
Import error on python 3.8
#256
matthiaskoenig
closed
4 years ago
3
The difference between cameo and cobrapy
#255
wintermute221
closed
4 years ago
2
FSEOF
#254
weif000
opened
4 years ago
1
Differential FVA has a compatibility issue
#253
liudongliangHI
closed
4 years ago
1
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