issues
search
biosustain
/
cameo
cameo - computer aided metabolic engineering & optimization
http://cameo.bio
Apache License 2.0
114
stars
44
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Installation problems
#252
danolson1
opened
4 years ago
3
Py2/3 compatible port
#251
ChiamYu
closed
4 years ago
0
FSEOF algorithm
#250
weif000
closed
4 years ago
0
Some pathway predictions result in an infinite loop
#249
kvikshaug
opened
5 years ago
0
Dropping Python2 support
#248
carrascomj
closed
5 years ago
2
Dropping Python2 support
#247
carrascomj
closed
5 years ago
0
Time to drop Python 2.7
#246
Midnighter
closed
4 years ago
2
fix: ignore conflicting targets
#245
Midnighter
closed
5 years ago
0
Differential FVA should exclude constrained reactions
#244
Midnighter
opened
5 years ago
0
Fix diff fva result
#243
Midnighter
closed
5 years ago
1
docs: fix some failing docstrings
#242
Midnighter
closed
5 years ago
1
chore: update coverage
#241
Midnighter
closed
5 years ago
0
Fix issues in differential FVA
#240
Midnighter
closed
5 years ago
5
Fix testing
#239
Midnighter
closed
5 years ago
1
Max flux value in http://cameo.bio/07-predict-heterologous-pathways.html
#238
mauriceling
opened
5 years ago
3
doc: fix wrong CLI usage example (fixes #236)
#237
phantomas1234
closed
5 years ago
3
Unable to run cameo design --product vanillin
#236
mauriceling
opened
5 years ago
5
AttributeError when importing cameo.flux_analysis.phenotypic_phase_plane
#235
djinnome
closed
5 years ago
1
fix: predicted pathways containing exch reactions for native compounds
#234
phantomas1234
closed
5 years ago
2
Boundary reactions in predicted pathway results can lead to higher growth rate
#233
Midnighter
closed
5 years ago
0
Fix pathway
#232
Midnighter
closed
5 years ago
1
Towards 0.11.10
#231
phantomas1234
closed
5 years ago
1
Refactor pathway prediction
#230
Midnighter
closed
5 years ago
1
style: correct new flake8 errors
#229
Midnighter
closed
5 years ago
1
Update path to pandas ipynb test
#228
kvikshaug
closed
5 years ago
2
cameo optgene
#227
dwelkie
closed
5 years ago
2
Fix optknock bugs
#226
KristianJensen
closed
5 years ago
1
refactor: make product translation a public method
#225
Midnighter
closed
5 years ago
1
fix: use `mode=lines` instead of `model=line` in new plotly API (#223)
#224
phantomas1234
closed
5 years ago
1
fix: use `mode=lines` instead of `model=line` in new plotly API
#223
phantomas1234
closed
5 years ago
2
Towards 0.11.7
#222
phantomas1234
closed
5 years ago
1
Fix copbrapy f and x_dict deprecation
#221
phantomas1234
closed
5 years ago
1
OptKnock's overwrite input of exclude KO reactions
#220
hvdinh16
closed
5 years ago
2
AttributeError: 'Solution' object has no attribute 'f'
#219
Ravasz
closed
5 years ago
2
Update simulation.py to use solution.objective_value vs. legacy solution.f
#218
jlerman44
closed
5 years ago
4
cameo optgene
#217
ghost
closed
5 years ago
11
install problems / jupyter
#216
ghost
opened
6 years ago
2
GrowthCouplingPotential
#215
KristianJensen
closed
3 years ago
7
"Failed to display Jupyter Widget" on online documentation
#214
bdelepine
opened
6 years ago
1
Problem with running DifferentialFVA
#213
jlerman44
closed
6 years ago
1
Fix the use of symengine in cameo
#212
Midnighter
opened
6 years ago
0
Refactor the model loading code into cobrapy
#211
Midnighter
opened
6 years ago
0
fix: repair Travis builds (#208)
#210
sgalkina
closed
6 years ago
0
optlang.exceptions.SolverError
#209
hongzhonglu
closed
6 years ago
2
fix: repair Travis builds
#208
Midnighter
closed
6 years ago
3
Fix issue with pip 10.0
#207
KristianJensen
closed
6 years ago
3
pip 10.0.3 module AttributeError when trying to import cameo
#206
paxelito
closed
6 years ago
2
hotfix: six string types
#205
sgalkina
closed
6 years ago
0
how to keep metanetx_universal_model_bigg_rhea_kegg_brenda database updated with metanetx database
#204
chang88ye
opened
6 years ago
3
Issues loading a local model
#203
navborg
opened
6 years ago
2
Previous
Next